BLASTX nr result
ID: Coptis25_contig00042905
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00042905 (250 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI32840.3| unnamed protein product [Vitis vinifera] 85 5e-15 ref|XP_002278394.1| PREDICTED: uncharacterized protein LOC100246... 85 5e-15 emb|CAN73373.1| hypothetical protein VITISV_006322 [Vitis vinifera] 85 5e-15 ref|XP_002319188.1| predicted protein [Populus trichocarpa] gi|2... 73 2e-11 ref|XP_002525693.1| conserved hypothetical protein [Ricinus comm... 72 4e-11 >emb|CBI32840.3| unnamed protein product [Vitis vinifera] Length = 502 Score = 85.1 bits (209), Expect = 5e-15 Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 4/86 (4%) Frame = +3 Query: 3 EFLSRSAGKYSGMTPRSSPKSTIPW----IKGYISSPPIKGVTLTPDRDYYSSFHNTPKR 170 EFLSRS TP SPKS+ W ++G IS +G+ +DYYS+FH TP R Sbjct: 367 EFLSRSGKTIPRGTPWDSPKSSSAWSDSPVRGVISRHKTRGIR--NQQDYYSTFHKTPSR 424 Query: 171 KRFSKKEWEDFTRESTRESLSELASS 248 K+FSKK+WEDFTRESTR+++ ++ SS Sbjct: 425 KKFSKKDWEDFTRESTRQAMGDMVSS 450 >ref|XP_002278394.1| PREDICTED: uncharacterized protein LOC100246460 [Vitis vinifera] Length = 537 Score = 85.1 bits (209), Expect = 5e-15 Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 4/86 (4%) Frame = +3 Query: 3 EFLSRSAGKYSGMTPRSSPKSTIPW----IKGYISSPPIKGVTLTPDRDYYSSFHNTPKR 170 EFLSRS TP SPKS+ W ++G IS +G+ +DYYS+FH TP R Sbjct: 402 EFLSRSGKTIPRGTPWDSPKSSSAWSDSPVRGVISRHKTRGIR--NQQDYYSTFHKTPSR 459 Query: 171 KRFSKKEWEDFTRESTRESLSELASS 248 K+FSKK+WEDFTRESTR+++ ++ SS Sbjct: 460 KKFSKKDWEDFTRESTRQAMGDMVSS 485 >emb|CAN73373.1| hypothetical protein VITISV_006322 [Vitis vinifera] Length = 317 Score = 85.1 bits (209), Expect = 5e-15 Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 4/86 (4%) Frame = +3 Query: 3 EFLSRSAGKYSGMTPRSSPKSTIPW----IKGYISSPPIKGVTLTPDRDYYSSFHNTPKR 170 EFLSRS TP SPKS+ W ++G IS +G+ +DYYS+FH TP R Sbjct: 182 EFLSRSGKTIPRGTPWDSPKSSSAWSDSPVRGVISRHKTRGIR--NQQDYYSTFHKTPSR 239 Query: 171 KRFSKKEWEDFTRESTRESLSELASS 248 K+FSKK+WEDFTRESTR+++ ++ SS Sbjct: 240 KKFSKKDWEDFTRESTRQAMGDMVSS 265 >ref|XP_002319188.1| predicted protein [Populus trichocarpa] gi|222857564|gb|EEE95111.1| predicted protein [Populus trichocarpa] Length = 501 Score = 73.2 bits (178), Expect = 2e-11 Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 8/90 (8%) Frame = +3 Query: 3 EFLSRSAGKYSGMTPR-SSPKSTIPWIKGYISSPPIKGVT------LTPDR-DYYSSFHN 158 EF SRS GK S +SPKS+ W +S P+KGV T D+ D+YS+FH Sbjct: 368 EFHSRS-GKMSPQGKMWNSPKSSSAW-----TSSPVKGVVSPSSHLATVDKQDHYSTFHK 421 Query: 159 TPKRKRFSKKEWEDFTRESTRESLSELASS 248 TP+RK+F+KK+WEDFTREST E++ E A+S Sbjct: 422 TPRRKKFTKKQWEDFTRESTHEAVMEWAAS 451 >ref|XP_002525693.1| conserved hypothetical protein [Ricinus communis] gi|223534993|gb|EEF36676.1| conserved hypothetical protein [Ricinus communis] Length = 502 Score = 72.4 bits (176), Expect = 4e-11 Identities = 38/82 (46%), Positives = 53/82 (64%) Frame = +3 Query: 3 EFLSRSAGKYSGMTPRSSPKSTIPWIKGYISSPPIKGVTLTPDRDYYSSFHNTPKRKRFS 182 EFLSRS SG SPKS W S+ P+KG +D+ S+FH TPK+K+F+ Sbjct: 378 EFLSRSGKMSSGGKMWGSPKSASGW-----SNSPVKGTK--DQQDFISTFHKTPKQKKFT 430 Query: 183 KKEWEDFTRESTRESLSELASS 248 + EWEDFTR+ST++++ E A+S Sbjct: 431 ETEWEDFTRDSTQQAVGEWAAS 452