BLASTX nr result

ID: Coptis25_contig00042905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042905
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32840.3| unnamed protein product [Vitis vinifera]               85   5e-15
ref|XP_002278394.1| PREDICTED: uncharacterized protein LOC100246...    85   5e-15
emb|CAN73373.1| hypothetical protein VITISV_006322 [Vitis vinifera]    85   5e-15
ref|XP_002319188.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002525693.1| conserved hypothetical protein [Ricinus comm...    72   4e-11

>emb|CBI32840.3| unnamed protein product [Vitis vinifera]
          Length = 502

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
 Frame = +3

Query: 3   EFLSRSAGKYSGMTPRSSPKSTIPW----IKGYISSPPIKGVTLTPDRDYYSSFHNTPKR 170
           EFLSRS       TP  SPKS+  W    ++G IS    +G+     +DYYS+FH TP R
Sbjct: 367 EFLSRSGKTIPRGTPWDSPKSSSAWSDSPVRGVISRHKTRGIR--NQQDYYSTFHKTPSR 424

Query: 171 KRFSKKEWEDFTRESTRESLSELASS 248
           K+FSKK+WEDFTRESTR+++ ++ SS
Sbjct: 425 KKFSKKDWEDFTRESTRQAMGDMVSS 450


>ref|XP_002278394.1| PREDICTED: uncharacterized protein LOC100246460 [Vitis vinifera]
          Length = 537

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
 Frame = +3

Query: 3   EFLSRSAGKYSGMTPRSSPKSTIPW----IKGYISSPPIKGVTLTPDRDYYSSFHNTPKR 170
           EFLSRS       TP  SPKS+  W    ++G IS    +G+     +DYYS+FH TP R
Sbjct: 402 EFLSRSGKTIPRGTPWDSPKSSSAWSDSPVRGVISRHKTRGIR--NQQDYYSTFHKTPSR 459

Query: 171 KRFSKKEWEDFTRESTRESLSELASS 248
           K+FSKK+WEDFTRESTR+++ ++ SS
Sbjct: 460 KKFSKKDWEDFTRESTRQAMGDMVSS 485


>emb|CAN73373.1| hypothetical protein VITISV_006322 [Vitis vinifera]
          Length = 317

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/86 (50%), Positives = 57/86 (66%), Gaps = 4/86 (4%)
 Frame = +3

Query: 3   EFLSRSAGKYSGMTPRSSPKSTIPW----IKGYISSPPIKGVTLTPDRDYYSSFHNTPKR 170
           EFLSRS       TP  SPKS+  W    ++G IS    +G+     +DYYS+FH TP R
Sbjct: 182 EFLSRSGKTIPRGTPWDSPKSSSAWSDSPVRGVISRHKTRGIR--NQQDYYSTFHKTPSR 239

Query: 171 KRFSKKEWEDFTRESTRESLSELASS 248
           K+FSKK+WEDFTRESTR+++ ++ SS
Sbjct: 240 KKFSKKDWEDFTRESTRQAMGDMVSS 265


>ref|XP_002319188.1| predicted protein [Populus trichocarpa] gi|222857564|gb|EEE95111.1|
           predicted protein [Populus trichocarpa]
          Length = 501

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 8/90 (8%)
 Frame = +3

Query: 3   EFLSRSAGKYSGMTPR-SSPKSTIPWIKGYISSPPIKGVT------LTPDR-DYYSSFHN 158
           EF SRS GK S      +SPKS+  W     +S P+KGV        T D+ D+YS+FH 
Sbjct: 368 EFHSRS-GKMSPQGKMWNSPKSSSAW-----TSSPVKGVVSPSSHLATVDKQDHYSTFHK 421

Query: 159 TPKRKRFSKKEWEDFTRESTRESLSELASS 248
           TP+RK+F+KK+WEDFTREST E++ E A+S
Sbjct: 422 TPRRKKFTKKQWEDFTRESTHEAVMEWAAS 451


>ref|XP_002525693.1| conserved hypothetical protein [Ricinus communis]
           gi|223534993|gb|EEF36676.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 502

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 38/82 (46%), Positives = 53/82 (64%)
 Frame = +3

Query: 3   EFLSRSAGKYSGMTPRSSPKSTIPWIKGYISSPPIKGVTLTPDRDYYSSFHNTPKRKRFS 182
           EFLSRS    SG     SPKS   W     S+ P+KG      +D+ S+FH TPK+K+F+
Sbjct: 378 EFLSRSGKMSSGGKMWGSPKSASGW-----SNSPVKGTK--DQQDFISTFHKTPKQKKFT 430

Query: 183 KKEWEDFTRESTRESLSELASS 248
           + EWEDFTR+ST++++ E A+S
Sbjct: 431 ETEWEDFTRDSTQQAVGEWAAS 452


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