BLASTX nr result
ID: Coptis25_contig00042898
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00042898 (407 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003630366.1| cyclase/dehydrase family protein [Medicago t... 132 4e-29 ref|XP_002273364.1| PREDICTED: uncharacterized protein LOC100262... 129 2e-28 dbj|BAJ93672.1| predicted protein [Hordeum vulgare subsp. vulgare] 124 6e-27 ref|XP_003559182.1| PREDICTED: uncharacterized protein LOC100844... 124 8e-27 ref|XP_002307063.1| predicted protein [Populus trichocarpa] gi|2... 123 1e-26 >ref|XP_003630366.1| cyclase/dehydrase family protein [Medicago truncatula] gi|355524388|gb|AET04842.1| cyclase/dehydrase family protein [Medicago truncatula] Length = 742 Score = 132 bits (331), Expect = 4e-29 Identities = 79/148 (53%), Positives = 85/148 (57%), Gaps = 13/148 (8%) Frame = +3 Query: 3 LSYEVNVIPRFNFPAIFLERIIRSDLPVNLKALARRAERNSGLNQKTLFLGRISAPTPEP 182 LSYEVNVIPRFNFPAIFLERI+RSDLPVNL+ALA R ERN LG P PE Sbjct: 217 LSYEVNVIPRFNFPAIFLERIVRSDLPVNLRALAYRVERN--------LLGNQKLPQPED 268 Query: 183 AVVYPYLHST-------------GSLLEKDQLFSGEFKENQTXXXXXXXXXXXXXEFNRR 323 LH T GSL E D+L G+ KE E N Sbjct: 269 D-----LHKTSLVVNGSSVKKINGSLCETDKLAPGQDKEG-LDTSISGSLPASSSELNSN 322 Query: 324 WGVFGKVCGLDKPCMVDEVHFRRFDGLL 407 WG+FGKVC LDKPC+VDEVH RRFDGLL Sbjct: 323 WGIFGKVCSLDKPCVVDEVHLRRFDGLL 350 >ref|XP_002273364.1| PREDICTED: uncharacterized protein LOC100262883 [Vitis vinifera] Length = 735 Score = 129 bits (325), Expect = 2e-28 Identities = 74/135 (54%), Positives = 86/135 (63%) Frame = +3 Query: 3 LSYEVNVIPRFNFPAIFLERIIRSDLPVNLKALARRAERNSGLNQKTLFLGRISAPTPEP 182 LSYEVNVIPRFNFPAIFLERIIRSDLPVNL+ALA R+E+N NQK F+ Sbjct: 210 LSYEVNVIPRFNFPAIFLERIIRSDLPVNLQALACRSEKNFEGNQKIPFIESSLGTASIA 269 Query: 183 AVVYPYLHSTGSLLEKDQLFSGEFKENQTXXXXXXXXXXXXXEFNRRWGVFGKVCGLDKP 362 V P + G+ L ++L G FK++ E + WGVFGKVC LD+P Sbjct: 270 DVANPGIDLDGA-LSVEKLSPGVFKKSHA-SSSFDPLFQSSSELSSNWGVFGKVCKLDRP 327 Query: 363 CMVDEVHFRRFDGLL 407 CMVDEVH RRFDGLL Sbjct: 328 CMVDEVHLRRFDGLL 342 >dbj|BAJ93672.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 710 Score = 124 bits (312), Expect = 6e-27 Identities = 71/138 (51%), Positives = 83/138 (60%), Gaps = 3/138 (2%) Frame = +3 Query: 3 LSYEVNVIPRFNFPAIFLERIIRSDLPVNLKALARRAERNSGLNQK---TLFLGRISAPT 173 L YEVNVIPRFNFPAIFLERIIRSDLPVNL ALA R+E+ N K T F G S P Sbjct: 196 LLYEVNVIPRFNFPAIFLERIIRSDLPVNLTALAFRSEKMYLENHKFGPTKFTGAESKP- 254 Query: 174 PEPAVVYPYLHSTGSLLEKDQLFSGEFKENQTXXXXXXXXXXXXXEFNRRWGVFGKVCGL 353 L+ + +E D + S +FKE E N +WGV+G VC L Sbjct: 255 ---------LNLRSATIENDVISSSKFKEAPASSGFGGVLASPPPELNGKWGVYGSVCRL 305 Query: 354 DKPCMVDEVHFRRFDGLL 407 D+PC+VDE+H RRFDGLL Sbjct: 306 DRPCVVDEIHLRRFDGLL 323 >ref|XP_003559182.1| PREDICTED: uncharacterized protein LOC100844212 [Brachypodium distachyon] Length = 713 Score = 124 bits (311), Expect = 8e-27 Identities = 67/137 (48%), Positives = 87/137 (63%), Gaps = 2/137 (1%) Frame = +3 Query: 3 LSYEVNVIPRFNFPAIFLERIIRSDLPVNLKALARRAERNSGLNQKTLFLG--RISAPTP 176 L YEVNVIPRFNFP+IFLERIIRSDLPVNL+ALA R+E+ L + L G + + P Sbjct: 199 LLYEVNVIPRFNFPSIFLERIIRSDLPVNLRALAFRSEK---LYLENLKRGSTKSTGANP 255 Query: 177 EPAVVYPYLHSTGSLLEKDQLFSGEFKENQTXXXXXXXXXXXXXEFNRRWGVFGKVCGLD 356 +P L+ +++E D +FS +F E E N +WG++G VC LD Sbjct: 256 KP------LNFRSAIVENDNIFSSKFAEAPPSSGSGAVLASPSPELNSKWGIYGNVCSLD 309 Query: 357 KPCMVDEVHFRRFDGLL 407 +PC+VDE+H RRFDGLL Sbjct: 310 RPCVVDEIHLRRFDGLL 326 >ref|XP_002307063.1| predicted protein [Populus trichocarpa] gi|222856512|gb|EEE94059.1| predicted protein [Populus trichocarpa] Length = 727 Score = 123 bits (309), Expect = 1e-26 Identities = 70/135 (51%), Positives = 85/135 (62%) Frame = +3 Query: 3 LSYEVNVIPRFNFPAIFLERIIRSDLPVNLKALARRAERNSGLNQKTLFLGRISAPTPEP 182 LSYEVNV+PR+NFPAIFLERII SDLPVNL+ALA RAER+ NQKT G + T Sbjct: 208 LSYEVNVMPRYNFPAIFLERIIGSDLPVNLRALACRAERDFEGNQKT---GITESETSMT 264 Query: 183 AVVYPYLHSTGSLLEKDQLFSGEFKENQTXXXXXXXXXXXXXEFNRRWGVFGKVCGLDKP 362 A P + G+ EKD+L + + K++ + N WGV GK C LD+ Sbjct: 265 ASTSPGMVLDGAFREKDKLSTEDLKQSY-PSSTFGPMLPPSNDLNNNWGVLGKACRLDRR 323 Query: 363 CMVDEVHFRRFDGLL 407 CMVDEVH RR+DGLL Sbjct: 324 CMVDEVHLRRYDGLL 338