BLASTX nr result

ID: Coptis25_contig00042850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042850
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165322.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   155   3e-36
ref|XP_004136398.1| PREDICTED: ABC transporter B family member 2...   155   3e-36
gb|EEC73824.1| hypothetical protein OsI_08549 [Oryza sativa Indi...   149   2e-34
ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2...   148   4e-34
ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2...   148   4e-34

>ref|XP_004165322.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter B family member
           2-like, partial [Cucumis sativus]
          Length = 1158

 Score =  155 bits (392), Expect = 3e-36
 Identities = 74/98 (75%), Positives = 84/98 (85%)
 Frame = +1

Query: 1   WDTTCREVRKIAIFFCGGAVATVFFYTMEHLCFGIMGERLTLRIRKEMFAAILTNEIGWF 180
           WDTT  E++KI++ FCGGAV TV F+ +EHLCFGIMGERLTLR+R+ MF AIL NEIGWF
Sbjct: 626 WDTTQHEIKKISLLFCGGAVLTVIFHAVEHLCFGIMGERLTLRVREMMFHAILRNEIGWF 685

Query: 181 DDANNNSPMLSSRLEADANLLRTIVIDRSTILLQNLSL 294
           DD NN S MLSSRLE DA LLRTIV+DRSTILLQNL+L
Sbjct: 686 DDMNNTSAMLSSRLETDATLLRTIVVDRSTILLQNLAL 723


>ref|XP_004136398.1| PREDICTED: ABC transporter B family member 2-like [Cucumis sativus]
          Length = 1232

 Score =  155 bits (392), Expect = 3e-36
 Identities = 74/98 (75%), Positives = 84/98 (85%)
 Frame = +1

Query: 1   WDTTCREVRKIAIFFCGGAVATVFFYTMEHLCFGIMGERLTLRIRKEMFAAILTNEIGWF 180
           WDTT  E++KI++ FCGGAV TV F+ +EHLCFGIMGERLTLR+R+ MF AIL NEIGWF
Sbjct: 700 WDTTQHEIKKISLLFCGGAVLTVIFHAVEHLCFGIMGERLTLRVREMMFHAILRNEIGWF 759

Query: 181 DDANNNSPMLSSRLEADANLLRTIVIDRSTILLQNLSL 294
           DD NN S MLSSRLE DA LLRTIV+DRSTILLQNL+L
Sbjct: 760 DDMNNTSAMLSSRLETDATLLRTIVVDRSTILLQNLAL 797


>gb|EEC73824.1| hypothetical protein OsI_08549 [Oryza sativa Indica Group]
          Length = 1264

 Score =  149 bits (377), Expect = 2e-34
 Identities = 72/98 (73%), Positives = 84/98 (85%)
 Frame = +1

Query: 1    WDTTCREVRKIAIFFCGGAVATVFFYTMEHLCFGIMGERLTLRIRKEMFAAILTNEIGWF 180
            W+TT REVRKIA+ FC GAV TV F+T+EHL FGIMGERLTLR+R+ MFAAIL NEIGWF
Sbjct: 726  WETTKREVRKIAVLFCCGAVLTVVFHTIEHLSFGIMGERLTLRVRERMFAAILRNEIGWF 785

Query: 181  DDANNNSPMLSSRLEADANLLRTIVIDRSTILLQNLSL 294
            DD ++ S MLSSRLE DA L+RTIV+DRSTILLQN+ +
Sbjct: 786  DDTSHTSSMLSSRLETDATLVRTIVVDRSTILLQNIGM 823


>ref|XP_003533440.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1245

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/98 (72%), Positives = 81/98 (82%)
 Frame = +1

Query: 1    WDTTCREVRKIAIFFCGGAVATVFFYTMEHLCFGIMGERLTLRIRKEMFAAILTNEIGWF 180
            W+TTC EV+KIA  FCG AV TV  + +EHL FGIMGERLTLR+R+ MF+AIL NEIGWF
Sbjct: 714  WETTCHEVKKIAFLFCGAAVITVTVHAIEHLSFGIMGERLTLRVREMMFSAILKNEIGWF 773

Query: 181  DDANNNSPMLSSRLEADANLLRTIVIDRSTILLQNLSL 294
            DD NN S MLSS+LE DA LLRTIV+DRSTILLQN+ L
Sbjct: 774  DDTNNTSSMLSSQLETDATLLRTIVVDRSTILLQNIGL 811


>ref|XP_003517674.1| PREDICTED: ABC transporter B family member 2-like [Glycine max]
          Length = 1246

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/98 (72%), Positives = 81/98 (82%)
 Frame = +1

Query: 1    WDTTCREVRKIAIFFCGGAVATVFFYTMEHLCFGIMGERLTLRIRKEMFAAILTNEIGWF 180
            W+TTC EV+KIA  FCG AV TV  + +EHL FGIMGERLTLR+R+ MF+AIL NEIGWF
Sbjct: 714  WETTCHEVKKIAFLFCGAAVITVTVHAIEHLSFGIMGERLTLRVREMMFSAILKNEIGWF 773

Query: 181  DDANNNSPMLSSRLEADANLLRTIVIDRSTILLQNLSL 294
            DD NN S MLSS+LE DA LLRTIV+DRSTILLQN+ L
Sbjct: 774  DDTNNTSSMLSSQLETDATLLRTIVVDRSTILLQNIGL 811


Top