BLASTX nr result

ID: Coptis25_contig00042836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042836
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002449843.1| hypothetical protein SORBIDRAFT_05g024303 [S...    80   2e-13
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]              80   2e-13
ref|XP_002438972.1| hypothetical protein SORBIDRAFT_10g029210 [S...    77   1e-12
gb|EAZ08016.1| hypothetical protein OsI_30282 [Oryza sativa Indi...    77   1e-12
gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japo...    77   2e-12

>ref|XP_002449843.1| hypothetical protein SORBIDRAFT_05g024303 [Sorghum bicolor]
           gi|241935686|gb|EES08831.1| hypothetical protein
           SORBIDRAFT_05g024303 [Sorghum bicolor]
          Length = 191

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/113 (33%), Positives = 66/113 (58%), Gaps = 4/113 (3%)
 Frame = -2

Query: 429 DKSRSYHTLRWDKLCRSKGEGGLGFRKSREMDQALISKHRWKLVKAEHSKWVNLFKAAYP 250
           DK    H + W+++CR K EGGLG+R     + A++++  W++++   S    L +A Y 
Sbjct: 47  DKENKMHWVSWEEMCRRKEEGGLGYRDLHLFNLAMLARQGWRILQNPDSLCAQLLRAKYG 106

Query: 249 MLEAMVDMKTLPGDVFYFFRGIVRTL----KLFLWKVGDGSNISIFQDPWLSH 103
              +++     PG + Y +R IVR L    K  +W++GDG  I+I++DPW+S+
Sbjct: 107 TNGSLLQTSEGPG-ISYTWRSIVRGLQALQKGLIWRIGDGMQINIWEDPWISN 158


>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
          Length = 1023

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 6/148 (4%)
 Frame = -2

Query: 426  KSRSYHTLRWDKLCRSKGEGGLGFRKSREMDQALISKHRWKLVKAEHSKWVNLFKAAYPM 247
            +SR  H + W+KLC SK +GGLGFR   + + AL++K  W+L+    S +  +FK  Y  
Sbjct: 682  ESRGMHWMAWNKLCSSKADGGLGFRSVNDFNSALLAKQLWRLITVPDSLFAKVFKGRYFR 741

Query: 246  LEAMVDMKTLPGDVFYFFRGIVRTLKL----FLWKVGDGSNISIFQDPWL-SHLGKPLIL 82
                +D K       Y +R I+    L     + +VG G++IS+++DPW+ +   +P I 
Sbjct: 742  KSNPLD-KLKSYSPSYGWRSIISARSLVKKGLINRVGSGASISVWEDPWIPAQFPRPAIS 800

Query: 81   K-DLLDRGPEVFNLKVNYLISQEDFSWN 1
               ++D      +LKVN LI      WN
Sbjct: 801  NGSVIDP-----SLKVNNLIDSRSNFWN 823


>ref|XP_002438972.1| hypothetical protein SORBIDRAFT_10g029210 [Sorghum bicolor]
           gi|241917195|gb|EER90339.1| hypothetical protein
           SORBIDRAFT_10g029210 [Sorghum bicolor]
          Length = 240

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 39/111 (35%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
 Frame = -2

Query: 429 DKSRSYHTLRWDKLCRSKGEGGLGFRKSREMDQALISKHRWKLVKAEHSKWVNLFKAAYP 250
           D     H + WD +CR K EGGLGFR     + A++++  W+L+    S    + KA Y 
Sbjct: 75  DNKNKMHWISWDTMCRRKEEGGLGFRDLHLFNLAMLARQAWRLLMTPDSLCGQVLKAKYY 134

Query: 249 MLEAMVDMKTLPGDVFYFFRGIVRTLKL----FLWKVGDGSNISIFQDPWL 109
               ++D K  PG + Y +R I+R +K      +W VGDG++I I+ +PW+
Sbjct: 135 RNCGLLDAKEAPG-ISYTWRSILRGIKALKDGLIWCVGDGNSIKIWLNPWI 184


>gb|EAZ08016.1| hypothetical protein OsI_30282 [Oryza sativa Indica Group]
          Length = 632

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
 Frame = -2

Query: 429 DKSRSYHTLRWDKLCRSKGEGGLGFRKSREMDQALISKHRWKLVKAEHSKWVNLFKAAYP 250
           +     H + W+ LCR K +GG+G+R     + A++++  W+L+    S    + +A Y 
Sbjct: 230 ENENKVHWVSWELLCRRKEQGGIGYRDLHLFNLAMLARQGWRLIMEPMSLCAQVLRAKYF 289

Query: 249 MLEAMVDMKTLPGDVFYFFRGIVRTL----KLFLWKVGDGSNISIFQDPWLSHLGKPLIL 82
               ++ ++  PG + Y +R IVR +    K  +W+VGDG+NI I+ DPWL      +  
Sbjct: 290 PTGDLMAVREKPG-ISYSWRSIVRGIQALKKGLIWRVGDGTNIDIWHDPWLP---SGITR 345

Query: 81  KDLLDRGPEVFNLKVNYLISQEDFSWN 1
           + +  RG  V N KV  LI      W+
Sbjct: 346 RPITPRGRTVVN-KVTDLIDPTTGKWD 371


>gb|EEE69154.1| hypothetical protein OsJ_28290 [Oryza sativa Japonica Group]
          Length = 615

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 45/147 (30%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
 Frame = -2

Query: 429 DKSRSYHTLRWDKLCRSKGEGGLGFRKSREMDQALISKHRWKLVKAEHSKWVNLFKAAYP 250
           +     H + W+ LCR K +GG+G+R     + A++++  W+L+    S    + +A Y 
Sbjct: 287 ENENKVHWVSWELLCRRKEQGGIGYRDLHLFNLAMLARQGWRLIMEPMSLCAQVLRAKYF 346

Query: 249 MLEAMVDMKTLPGDVFYFFRGIVRTL----KLFLWKVGDGSNISIFQDPWLSHLGKPLIL 82
               ++ ++  PG + Y +R IVR +    K  +W+VGDG+NI I+ DPWL      +  
Sbjct: 347 PTGDLMAVREKPG-ISYSWRSIVRGIQALKKGLIWRVGDGTNIDIWHDPWLP---SGITR 402

Query: 81  KDLLDRGPEVFNLKVNYLISQEDFSWN 1
           + +  RG  V N KV  LI      W+
Sbjct: 403 RPITPRGRTVVN-KVTDLIDPTIGKWD 428


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