BLASTX nr result

ID: Coptis25_contig00042806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042806
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37639.3| unnamed protein product [Vitis vinifera]              210   8e-53
ref|XP_002521724.1| conserved hypothetical protein [Ricinus comm...   202   3e-50
ref|XP_003516521.1| PREDICTED: uncharacterized protein LOC100788...   200   1e-49
ref|XP_002272829.2| PREDICTED: uncharacterized protein LOC100253...   199   1e-49
ref|XP_003576807.1| PREDICTED: uncharacterized protein LOC100827...   193   1e-47

>emb|CBI37639.3| unnamed protein product [Vitis vinifera]
          Length = 1230

 Score =  210 bits (535), Expect = 8e-53
 Identities = 106/152 (69%), Positives = 127/152 (83%), Gaps = 1/152 (0%)
 Frame = -3

Query: 454 SLSDISLLEVTTKARGRPNGYRKIIKGCKCLYLGIDDNRQEMGTTVVVRDLFYNQPVRRK 275
           S+SD+SLLE+ TK +GRPNGYRK++KGCKCLYLGIDD+RQ++GTTVVVRDLFYNQPVRRK
Sbjct: 102 SISDVSLLEIVTKTQGRPNGYRKVMKGCKCLYLGIDDDRQDVGTTVVVRDLFYNQPVRRK 161

Query: 274 CMQSSPKKVLDSVKKCVLRVAIVHPQVSFRVTDIESVDEVLHTHPSASPLPLVSSGFGI- 98
            +QSSPKKVL SVKKCV R+A+VH  VSF+V DIES DE+L T  S+SPL L+ SG GI 
Sbjct: 162 YLQSSPKKVLHSVKKCVFRIALVHSNVSFKVVDIESDDELLCTKSSSSPLSLLISGLGIE 221

Query: 97  DVSCLCELNFSKGIWELSGYISVPVDTCSMKA 2
           D S L ELN + GI +LSGY+S P +T S+KA
Sbjct: 222 DSSSLHELNITDGILKLSGYVSGPCNTFSIKA 253


>ref|XP_002521724.1| conserved hypothetical protein [Ricinus communis]
           gi|223539115|gb|EEF40711.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1137

 Score =  202 bits (513), Expect = 3e-50
 Identities = 101/151 (66%), Positives = 128/151 (84%), Gaps = 1/151 (0%)
 Frame = -3

Query: 454 SLSDISLLEVTTKARGRPNGYRKIIKGCKCLYLGIDDNRQEMGTTVVVRDLFYNQPVRRK 275
           S+SD+SLLE+ TKARGRPNGYRK++KG KCLYLG++D+R+++GTTVVVRDLFYNQPVRRK
Sbjct: 102 SISDVSLLEIITKARGRPNGYRKVLKGSKCLYLGVNDDRKDVGTTVVVRDLFYNQPVRRK 161

Query: 274 CMQSSPKKVLDSVKKCVLRVAIVHPQVSFRVTDIESVDEVLHTHPSASPLPLVSSGFGI- 98
           CMQSS KKVLDSVKKC+LR+A VH +VSF+V DIES DE+L+T PS S L L+ S FGI 
Sbjct: 162 CMQSSLKKVLDSVKKCILRIAFVHSKVSFKVIDIESEDELLYTRPS-SALSLLMSSFGIE 220

Query: 97  DVSCLCELNFSKGIWELSGYISVPVDTCSMK 5
           D++   EL+ S G+ +LSGYIS P ++ ++K
Sbjct: 221 DLNFFHELDVSNGVLKLSGYISGPCNSLTIK 251


>ref|XP_003516521.1| PREDICTED: uncharacterized protein LOC100788019 [Glycine max]
          Length = 1208

 Score =  200 bits (508), Expect = 1e-49
 Identities = 97/151 (64%), Positives = 121/151 (80%), Gaps = 1/151 (0%)
 Frame = -3

Query: 454 SLSDISLLEVTTKARGRPNGYRKIIKGCKCLYLGIDDNRQEMGTTVVVRDLFYNQPVRRK 275
           S+S++SLLE+ TK  GRPNGYRK++KGCKCLYLGIDD+R+E+GTTVVVRDLFYNQPVRRK
Sbjct: 102 SISEVSLLEIVTKTYGRPNGYRKVLKGCKCLYLGIDDDRKEVGTTVVVRDLFYNQPVRRK 161

Query: 274 CMQSSPKKVLDSVKKCVLRVAIVHPQVSFRVTDIESVDEVLHTHPSASPLPLVSSGFGID 95
            MQSSP KVL S+K C++R+A+V P +SF+V DIE  DE+  TH ++SPLPLV+SGFG++
Sbjct: 162 YMQSSPNKVLQSIKNCIMRLALVRPNISFKVVDIEREDELFCTHSASSPLPLVTSGFGVE 221

Query: 94  V-SCLCELNFSKGIWELSGYISVPVDTCSMK 5
           V S L  L     I +LSGYIS P +T   K
Sbjct: 222 VASSLHNLEVENDIVKLSGYISGPCNTVYTK 252


>ref|XP_002272829.2| PREDICTED: uncharacterized protein LOC100253902 [Vitis vinifera]
          Length = 1218

 Score =  199 bits (507), Expect = 1e-49
 Identities = 100/140 (71%), Positives = 118/140 (84%), Gaps = 1/140 (0%)
 Frame = -3

Query: 454 SLSDISLLEVTTKARGRPNGYRKIIKGCKCLYLGIDDNRQEMGTTVVVRDLFYNQPVRRK 275
           S+SD+SLLE+ TK +GRPNGYRK++KGCKCLYLGIDD+RQ++GTTVVVRDLFYNQPVRRK
Sbjct: 102 SISDVSLLEIVTKTQGRPNGYRKVMKGCKCLYLGIDDDRQDVGTTVVVRDLFYNQPVRRK 161

Query: 274 CMQSSPKKVLDSVKKCVLRVAIVHPQVSFRVTDIESVDEVLHTHPSASPLPLVSSGFGI- 98
            +QSSPKKVL SVKKCV R+A+VH  VSF+V DIES DE+L T  S+SPL L+ SG GI 
Sbjct: 162 YLQSSPKKVLHSVKKCVFRIALVHSNVSFKVVDIESDDELLCTKSSSSPLSLLISGLGIE 221

Query: 97  DVSCLCELNFSKGIWELSGY 38
           D S L ELN + GI +LSGY
Sbjct: 222 DSSSLHELNITDGILKLSGY 241


>ref|XP_003576807.1| PREDICTED: uncharacterized protein LOC100827102 [Brachypodium
           distachyon]
          Length = 1001

 Score =  193 bits (491), Expect = 1e-47
 Identities = 100/152 (65%), Positives = 122/152 (80%), Gaps = 1/152 (0%)
 Frame = -3

Query: 454 SLSDISLLEVTTKARGRPNGYRKIIKGCKCLYLGIDDNRQEMGTTVVVRDLFYNQPVRRK 275
           SLSDIS++EV TK+RGRPN Y KIIKG KC +LGIDD R+ +GTTVVVR+LFYNQPVRRK
Sbjct: 114 SLSDISVVEVRTKSRGRPNSYCKIIKGSKCSHLGIDDQREAVGTTVVVRELFYNQPVRRK 173

Query: 274 CMQSSPKKVLDSVKKCVLRVAIVHPQVSFRVTDIESVDEVLHTHPSASPLPLVSSGFGID 95
            MQSS K+ L +VKKCVLRVA++HPQ+SFR+ DI+S DE+L T PS+S LPL+S+ FG D
Sbjct: 174 QMQSSHKRELQNVKKCVLRVALIHPQISFRLLDIDSEDELLCTVPSSSSLPLISNSFGND 233

Query: 94  V-SCLCELNFSKGIWELSGYISVPVDTCSMKA 2
           V SCL E++ S   W LSG+IS P D  S K+
Sbjct: 234 VSSCLHEISTSDQNWALSGHISGPTDVFSNKS 265


Top