BLASTX nr result

ID: Coptis25_contig00042801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042801
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556256.1| PREDICTED: protein IDA-LIKE 1-like [Glycine ...    68   7e-10
ref|XP_003535511.1| PREDICTED: protein IDA-like [Glycine max]          67   2e-09
ref|XP_002314892.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_003516864.1| PREDICTED: protein IDA-like [Glycine max]          58   9e-07
ref|XP_003518833.1| PREDICTED: protein IDA-LIKE 1-like [Glycine ...    57   2e-06

>ref|XP_003556256.1| PREDICTED: protein IDA-LIKE 1-like [Glycine max]
          Length = 94

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
 Frame = -1

Query: 311 MSSSPPPQSLHVS----RCLIFLVLFILPCCCTSTRSGGTVIIADGLSPQRQHKLEVGIR 144
           M++S   ++LH+        I L   +L   CT+TR+G T+ + +G    R  + +    
Sbjct: 1   MANSHYSKTLHLPCKAFSLAILLAFLLLVGSCTATRTGATMRLNEGSELLRPKQQKPRFP 60

Query: 143 YQAWVFNYFPKGTPIPPSGPSRGHNSVVDSVLHN 42
           Y+  VFN+FPKG PIPPSGPS+ HNS+V S   N
Sbjct: 61  YKGLVFNFFPKGVPIPPSGPSKRHNSLVASTPQN 94


>ref|XP_003535511.1| PREDICTED: protein IDA-like [Glycine max]
          Length = 94

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
 Frame = -1

Query: 311 MSSSPPPQSLHVS----RCLIFLVLFILPCCCTSTRSGGTVIIADGLSPQRQHKLEVGIR 144
           M++S   ++LH+        I LV  +L   CT+ R+G T+ + +G    R+ + +    
Sbjct: 1   MANSHYSKTLHLPCKSFSMAILLVYLLLVGSCTAIRTGATMRLNEGSELLRRKQQQPRFP 60

Query: 143 YQAWVFNYFPKGTPIPPSGPSRGHNSVVDSVLHN 42
           Y+  VFN+ PKG PIPPSGPS+ HNSVV S   N
Sbjct: 61  YKGLVFNFLPKGVPIPPSGPSKRHNSVVASTPKN 94


>ref|XP_002314892.1| predicted protein [Populus trichocarpa] gi|222863932|gb|EEF01063.1|
           predicted protein [Populus trichocarpa]
          Length = 95

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/88 (39%), Positives = 53/88 (60%), Gaps = 12/88 (13%)
 Frame = -1

Query: 290 QSLHVS----RCLIFLVLFILPCCCTSTRSGGTVI-------IADGLSPQRQ-HKLEVGI 147
           Q+ H+S     CL+F++ F+L   C++TR G T++        ++ + P R+ +K   G 
Sbjct: 9   QAKHLSFGSITCLLFII-FLLVTSCSATRPGATLMGDKDTLKESENVKPYRRLYKTSFGH 67

Query: 146 RYQAWVFNYFPKGTPIPPSGPSRGHNSV 63
           R    VFN+ PKG PIPPSGPS+ HNS+
Sbjct: 68  RNH--VFNFLPKGVPIPPSGPSKRHNSI 93


>ref|XP_003516864.1| PREDICTED: protein IDA-like [Glycine max]
          Length = 94

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/96 (37%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
 Frame = -1

Query: 311 MSSSPPPQSLHV-----SRCLIFLVLFILPCCCTSTRSGGTVIIADGLSP-QRQHKLEVG 150
           M++    +SLH+     S  L+F+ L ++  C  + R G T+ + +     +R+   + G
Sbjct: 1   MANYHSSKSLHLPCKTLSLVLLFVYLLLIGSC-DAIRIGQTMKLNETREILKRKRNNQHG 59

Query: 149 IRYQAWVFNYFPKGTPIPPSGPSRGHNSVVDSVLHN 42
             Y++ VFN+FPKG P+PPSGPS+ HN+VVDS  +N
Sbjct: 60  FPYKSMVFNFFPKG-PVPPSGPSKRHNAVVDSTPNN 94


>ref|XP_003518833.1| PREDICTED: protein IDA-LIKE 1-like [Glycine max]
          Length = 95

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/96 (35%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
 Frame = -1

Query: 311 MSSSPPPQSLHV-----SRCLIFLVLFILPCCCTSTRSGGTVIIADGLSPQR-QHKLEVG 150
           M++    +SLH+     S  ++  V  +L   C + R G T+ + +     + +H  + G
Sbjct: 1   MANYHSSKSLHLPCKTLSLVVLLFVYLLLIGSCDAIRMGQTMKLNERREILKGKHNNQHG 60

Query: 149 IRYQAWVFNYFPKGTPIPPSGPSRGHNSVVDSVLHN 42
             Y++ VFN+FPKG+ +PPSGPS+ HN+VVDS  +N
Sbjct: 61  FPYKSMVFNFFPKGS-VPPSGPSKRHNAVVDSTPNN 95


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