BLASTX nr result

ID: Coptis25_contig00042773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042773
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002305601.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/96 (41%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
 Frame = +3

Query: 3   WITTAVMRKAKELXXXXXXXXXXX--PRCLFTSESLTTLKIEMEHDLRMPSLINLPSLKV 176
           WI+ AV R  K+L             P CLF  E+LT L+I M + L++PS I+L  LK+
Sbjct: 116 WISAAVNRNVKDLYLELRDFEASFVLPHCLFNCETLTELEINMPYILKLPSSISLSCLKI 175

Query: 177 LHLGHVCIYVDGDFQVSFRFPNLEELYLKECNWMEI 284
           L+L  V    D   Q  F  PNL EL + ECNWM +
Sbjct: 176 LNLYEVIFTDDHSTQQLFSLPNLVELEIHECNWMNL 211


>ref|XP_002305601.1| predicted protein [Populus trichocarpa] gi|222848565|gb|EEE86112.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
 Frame = +3

Query: 3   WITTAVMRKAKELXXXXXXXXXXX---PRCLFTSESLTTLKIEMEHDLRMPSLINLPSLK 173
           WI  A+  K +EL              P CLFT +SLT L++ + HDL++ S I LP+LK
Sbjct: 89  WIFAALCCKFQELKLDLYQYNANESLLPHCLFTFQSLTVLELYLFHDLKLLSTICLPNLK 148

Query: 174 VLHLGHVCIYVDGDFQVSFRFPNLEELYLKECNWME 281
            L L  +    D   Q+     NL ++ L EC W +
Sbjct: 149 ELKLSFITFVDDHSTQLFDGCLNLRKVTLDECTWKD 184


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