BLASTX nr result
ID: Coptis25_contig00042773
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00042773 (285 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2... 72 6e-11 ref|XP_002305601.1| predicted protein [Populus trichocarpa] gi|2... 55 6e-06 >ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1| predicted protein [Populus trichocarpa] Length = 460 Score = 71.6 bits (174), Expect = 6e-11 Identities = 40/96 (41%), Positives = 52/96 (54%), Gaps = 2/96 (2%) Frame = +3 Query: 3 WITTAVMRKAKELXXXXXXXXXXX--PRCLFTSESLTTLKIEMEHDLRMPSLINLPSLKV 176 WI+ AV R K+L P CLF E+LT L+I M + L++PS I+L LK+ Sbjct: 116 WISAAVNRNVKDLYLELRDFEASFVLPHCLFNCETLTELEINMPYILKLPSSISLSCLKI 175 Query: 177 LHLGHVCIYVDGDFQVSFRFPNLEELYLKECNWMEI 284 L+L V D Q F PNL EL + ECNWM + Sbjct: 176 LNLYEVIFTDDHSTQQLFSLPNLVELEIHECNWMNL 211 >ref|XP_002305601.1| predicted protein [Populus trichocarpa] gi|222848565|gb|EEE86112.1| predicted protein [Populus trichocarpa] Length = 279 Score = 55.1 bits (131), Expect = 6e-06 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 3/96 (3%) Frame = +3 Query: 3 WITTAVMRKAKELXXXXXXXXXXX---PRCLFTSESLTTLKIEMEHDLRMPSLINLPSLK 173 WI A+ K +EL P CLFT +SLT L++ + HDL++ S I LP+LK Sbjct: 89 WIFAALCCKFQELKLDLYQYNANESLLPHCLFTFQSLTVLELYLFHDLKLLSTICLPNLK 148 Query: 174 VLHLGHVCIYVDGDFQVSFRFPNLEELYLKECNWME 281 L L + D Q+ NL ++ L EC W + Sbjct: 149 ELKLSFITFVDDHSTQLFDGCLNLRKVTLDECTWKD 184