BLASTX nr result

ID: Coptis25_contig00042769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042769
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307474.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002309913.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23
ref|XP_002300949.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
emb|CBI37533.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002274206.1| PREDICTED: transcriptional activator Myb [Vi...   109   3e-22

>ref|XP_002307474.1| predicted protein [Populus trichocarpa] gi|222856923|gb|EEE94470.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  115 bits (288), Expect = 4e-24
 Identities = 53/62 (85%), Positives = 57/62 (91%), Gaps = 1/62 (1%)
 Frame = +3

Query: 42  MEDSAGGSSNDDAK-TCCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRL 218
           ME+S  G+S+DDAK T CPRGHWRPAED+KLRQLVEQYG QNWNSIAEKLQGRSGKSCRL
Sbjct: 1   MEESLAGNSSDDAKSTACPRGHWRPAEDDKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRL 60

Query: 219 RW 224
           RW
Sbjct: 61  RW 62


>ref|XP_002309913.1| predicted protein [Populus trichocarpa] gi|222852816|gb|EEE90363.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/61 (83%), Positives = 53/61 (86%)
 Frame = +3

Query: 42  MEDSAGGSSNDDAKTCCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLR 221
           MED  G SS+DD KT C RGHWRPAEDEKLRQLV+QYGPQNWN IAE LQGRSGKSCRLR
Sbjct: 1   MEDLKGSSSSDDGKTSCHRGHWRPAEDEKLRQLVDQYGPQNWNFIAEHLQGRSGKSCRLR 60

Query: 222 W 224
           W
Sbjct: 61  W 61


>ref|XP_002300949.1| predicted protein [Populus trichocarpa] gi|222842675|gb|EEE80222.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  111 bits (277), Expect = 7e-23
 Identities = 52/63 (82%), Positives = 55/63 (87%), Gaps = 1/63 (1%)
 Frame = +3

Query: 39  MMEDSAGGSSNDDAK-TCCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCR 215
           M E S  G+S+DDAK T CPRGHWRPAED+KLRQLVEQYG QNWN IAEKLQGRSGKSCR
Sbjct: 1   MEEYSLAGNSSDDAKSTACPRGHWRPAEDDKLRQLVEQYGAQNWNDIAEKLQGRSGKSCR 60

Query: 216 LRW 224
           LRW
Sbjct: 61  LRW 63


>emb|CBI37533.3| unnamed protein product [Vitis vinifera]
          Length = 344

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/61 (81%), Positives = 54/61 (88%)
 Frame = +3

Query: 42  MEDSAGGSSNDDAKTCCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLR 221
           MEDSAGGSS+D     C RGHWRPAEDEKLRQLV+QYGP NWNSIA+KL+GRSGKSCRLR
Sbjct: 1   MEDSAGGSSDDGRN--CQRGHWRPAEDEKLRQLVDQYGPHNWNSIADKLEGRSGKSCRLR 58

Query: 222 W 224
           W
Sbjct: 59  W 59


>ref|XP_002274206.1| PREDICTED: transcriptional activator Myb [Vitis vinifera]
          Length = 302

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/61 (81%), Positives = 54/61 (88%)
 Frame = +3

Query: 42  MEDSAGGSSNDDAKTCCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLR 221
           MEDSAGGSS+D     C RGHWRPAEDEKLRQLV+QYGP NWNSIA+KL+GRSGKSCRLR
Sbjct: 1   MEDSAGGSSDDGRN--CQRGHWRPAEDEKLRQLVDQYGPHNWNSIADKLEGRSGKSCRLR 58

Query: 222 W 224
           W
Sbjct: 59  W 59


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