BLASTX nr result
ID: Coptis25_contig00042769
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00042769 (226 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002307474.1| predicted protein [Populus trichocarpa] gi|2... 115 4e-24 ref|XP_002309913.1| predicted protein [Populus trichocarpa] gi|2... 113 1e-23 ref|XP_002300949.1| predicted protein [Populus trichocarpa] gi|2... 111 7e-23 emb|CBI37533.3| unnamed protein product [Vitis vinifera] 109 3e-22 ref|XP_002274206.1| PREDICTED: transcriptional activator Myb [Vi... 109 3e-22 >ref|XP_002307474.1| predicted protein [Populus trichocarpa] gi|222856923|gb|EEE94470.1| predicted protein [Populus trichocarpa] Length = 334 Score = 115 bits (288), Expect = 4e-24 Identities = 53/62 (85%), Positives = 57/62 (91%), Gaps = 1/62 (1%) Frame = +3 Query: 42 MEDSAGGSSNDDAK-TCCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRL 218 ME+S G+S+DDAK T CPRGHWRPAED+KLRQLVEQYG QNWNSIAEKLQGRSGKSCRL Sbjct: 1 MEESLAGNSSDDAKSTACPRGHWRPAEDDKLRQLVEQYGAQNWNSIAEKLQGRSGKSCRL 60 Query: 219 RW 224 RW Sbjct: 61 RW 62 >ref|XP_002309913.1| predicted protein [Populus trichocarpa] gi|222852816|gb|EEE90363.1| predicted protein [Populus trichocarpa] Length = 348 Score = 113 bits (283), Expect = 1e-23 Identities = 51/61 (83%), Positives = 53/61 (86%) Frame = +3 Query: 42 MEDSAGGSSNDDAKTCCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLR 221 MED G SS+DD KT C RGHWRPAEDEKLRQLV+QYGPQNWN IAE LQGRSGKSCRLR Sbjct: 1 MEDLKGSSSSDDGKTSCHRGHWRPAEDEKLRQLVDQYGPQNWNFIAEHLQGRSGKSCRLR 60 Query: 222 W 224 W Sbjct: 61 W 61 >ref|XP_002300949.1| predicted protein [Populus trichocarpa] gi|222842675|gb|EEE80222.1| predicted protein [Populus trichocarpa] Length = 264 Score = 111 bits (277), Expect = 7e-23 Identities = 52/63 (82%), Positives = 55/63 (87%), Gaps = 1/63 (1%) Frame = +3 Query: 39 MMEDSAGGSSNDDAK-TCCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCR 215 M E S G+S+DDAK T CPRGHWRPAED+KLRQLVEQYG QNWN IAEKLQGRSGKSCR Sbjct: 1 MEEYSLAGNSSDDAKSTACPRGHWRPAEDDKLRQLVEQYGAQNWNDIAEKLQGRSGKSCR 60 Query: 216 LRW 224 LRW Sbjct: 61 LRW 63 >emb|CBI37533.3| unnamed protein product [Vitis vinifera] Length = 344 Score = 109 bits (272), Expect = 3e-22 Identities = 50/61 (81%), Positives = 54/61 (88%) Frame = +3 Query: 42 MEDSAGGSSNDDAKTCCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLR 221 MEDSAGGSS+D C RGHWRPAEDEKLRQLV+QYGP NWNSIA+KL+GRSGKSCRLR Sbjct: 1 MEDSAGGSSDDGRN--CQRGHWRPAEDEKLRQLVDQYGPHNWNSIADKLEGRSGKSCRLR 58 Query: 222 W 224 W Sbjct: 59 W 59 >ref|XP_002274206.1| PREDICTED: transcriptional activator Myb [Vitis vinifera] Length = 302 Score = 109 bits (272), Expect = 3e-22 Identities = 50/61 (81%), Positives = 54/61 (88%) Frame = +3 Query: 42 MEDSAGGSSNDDAKTCCPRGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSGKSCRLR 221 MEDSAGGSS+D C RGHWRPAEDEKLRQLV+QYGP NWNSIA+KL+GRSGKSCRLR Sbjct: 1 MEDSAGGSSDDGRN--CQRGHWRPAEDEKLRQLVDQYGPHNWNSIADKLEGRSGKSCRLR 58 Query: 222 W 224 W Sbjct: 59 W 59