BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042767
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-m...   109   2e-22
emb|CBI16383.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   102   3e-20
ref|XP_003540714.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-specifi...   102   4e-20
ref|XP_003539065.1| PREDICTED: tRNA-specific 2-thiouridylase mnm...   102   4e-20

>ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Ricinus communis] gi|223547418|gb|EEF48913.1|
           tRNA
           (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
           putative [Ricinus communis]
          Length = 497

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/69 (72%), Positives = 56/69 (81%)
 Frame = -1

Query: 209 NNAEIKQVEPCYLSCSMPGKKKLKIAVLLSGGVDSSVALHLLHHAGHSCTAFYLKIWFQE 30
           NNA    +EP YLSC +P K  L+IA+LLSGGVDSSVAL LLH AGH CTAFYLKIWFQE
Sbjct: 49  NNAGCGIIEPNYLSCCLPDKNNLRIALLLSGGVDSSVALRLLHAAGHHCTAFYLKIWFQE 108

Query: 29  DYENFWAAC 3
           D+ENFW+ C
Sbjct: 109 DFENFWSEC 117


>emb|CBI16383.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score =  102 bits (255), Expect = 3e-20
 Identities = 48/58 (82%), Positives = 52/58 (89%)
 Frame = -1

Query: 176 YLSCSMPGKKKLKIAVLLSGGVDSSVALHLLHHAGHSCTAFYLKIWFQEDYENFWAAC 3
           YLSCS+P  + LKIAVLLSGGVDSSVAL LLH AGHSCTAFYLKIWFQED+ENFW+ C
Sbjct: 78  YLSCSLPNNR-LKIAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSEC 134


>ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Vitis vinifera]
          Length = 540

 Score =  102 bits (255), Expect = 3e-20
 Identities = 48/58 (82%), Positives = 52/58 (89%)
 Frame = -1

Query: 176 YLSCSMPGKKKLKIAVLLSGGVDSSVALHLLHHAGHSCTAFYLKIWFQEDYENFWAAC 3
           YLSCS+P  + LKIAVLLSGGVDSSVAL LLH AGHSCTAFYLKIWFQED+ENFW+ C
Sbjct: 74  YLSCSLPNNR-LKIAVLLSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSEC 130


>ref|XP_003540714.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-specific 2-thiouridylase
           mnmA-like [Glycine max]
          Length = 467

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = -1

Query: 176 YLSCSMPGKKKLKIAVLLSGGVDSSVALHLLHHAGHSCTAFYLKIWFQEDYENFWAAC 3
           YL CSMP    L++AVL+SGGVDSSVAL LLH AGHSCTAFYLKIWFQED+ENFW+ C
Sbjct: 65  YLRCSMPQNSPLRVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSEC 122


>ref|XP_003539065.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Glycine max]
          Length = 488

 Score =  102 bits (253), Expect = 4e-20
 Identities = 45/58 (77%), Positives = 50/58 (86%)
 Frame = -1

Query: 176 YLSCSMPGKKKLKIAVLLSGGVDSSVALHLLHHAGHSCTAFYLKIWFQEDYENFWAAC 3
           YL CSMP    L++AVL+SGGVDSSVAL LLH AGHSCTAFYLKIWFQED+ENFW+ C
Sbjct: 51  YLRCSMPQNSPLRVAVLVSGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFENFWSEC 108