BLASTX nr result

ID: Coptis25_contig00042761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042761
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [...   135   4e-30
emb|CBI16589.3| unnamed protein product [Vitis vinifera]              135   4e-30
ref|XP_002320711.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [...   127   1e-27
ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [...   124   6e-27

>ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
          Length = 465

 Score =  135 bits (339), Expect = 4e-30
 Identities = 79/150 (52%), Positives = 95/150 (63%), Gaps = 12/150 (8%)
 Frame = -2

Query: 417 MSQCVPSWNLDETTTTVSLGIIQNTNMNDSKAPDVVDADLDYEVAELTWENGQLAMHGLG 238
           MSQCVPSW++D+  T   L +  ++N   S APDV    LDYEVAELTWENGQLAMHGLG
Sbjct: 1   MSQCVPSWDIDDNPTPPRLFLRSHSN---STAPDV--PMLDYEVAELTWENGQLAMHGLG 55

Query: 237 HPRVIGKP----SSTKYTWEKPRASGTLESIVNQAAQLAPCNAPVH--HNELVPWFDGDR 76
            PRV  KP    + +KY WEKPRA GTLESIVNQA +L     P    +++LVPW D  R
Sbjct: 56  QPRVPAKPVASAAVSKYPWEKPRAGGTLESIVNQATRLPHHKPPPEGANDDLVPWLDHQR 115

Query: 75  TIVPG------AMAMDALVPSSSGIRFTHD 4
            +         AM MDALVP S+    T++
Sbjct: 116 AVAAAAAAASVAMTMDALVPCSNNNNTTNN 145


>emb|CBI16589.3| unnamed protein product [Vitis vinifera]
          Length = 278

 Score =  135 bits (339), Expect = 4e-30
 Identities = 79/150 (52%), Positives = 95/150 (63%), Gaps = 12/150 (8%)
 Frame = -2

Query: 417 MSQCVPSWNLDETTTTVSLGIIQNTNMNDSKAPDVVDADLDYEVAELTWENGQLAMHGLG 238
           MSQCVPSW++D+  T   L +  ++N   S APDV    LDYEVAELTWENGQLAMHGLG
Sbjct: 1   MSQCVPSWDIDDNPTPPRLFLRSHSN---STAPDV--PMLDYEVAELTWENGQLAMHGLG 55

Query: 237 HPRVIGKP----SSTKYTWEKPRASGTLESIVNQAAQLAPCNAPVH--HNELVPWFDGDR 76
            PRV  KP    + +KY WEKPRA GTLESIVNQA +L     P    +++LVPW D  R
Sbjct: 56  QPRVPAKPVASAAVSKYPWEKPRAGGTLESIVNQATRLPHHKPPPEGANDDLVPWLDHQR 115

Query: 75  TIVPG------AMAMDALVPSSSGIRFTHD 4
            +         AM MDALVP S+    T++
Sbjct: 116 AVAAAAAAASVAMTMDALVPCSNNNNTTNN 145


>ref|XP_002320711.1| predicted protein [Populus trichocarpa] gi|222861484|gb|EEE99026.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  134 bits (336), Expect = 1e-29
 Identities = 75/140 (53%), Positives = 90/140 (64%), Gaps = 11/140 (7%)
 Frame = -2

Query: 411 QCVPSWNLDETTTTV-SLGIIQNTNMNDSKAPDVVDADLDYEVAELTWENGQLAMHGLGH 235
           QCVPSW +D+  TT   L +  ++N   S APD+    LDYEVAELTWENGQ+AMHGLG 
Sbjct: 4   QCVPSWEVDDNRTTAPKLSLRFHSN---SSAPDM--PMLDYEVAELTWENGQIAMHGLGP 58

Query: 234 PRVIGKP----SSTKYTWEKPRASGTLESIVNQAAQLAPCNAPVHHN------ELVPWFD 85
           PRV  KP    S +KYTW+KPRASGTLESIVNQA  +  CN     N      +L+PWF+
Sbjct: 59  PRVPAKPIASTSPSKYTWDKPRASGTLESIVNQATCVPQCNKATFDNSTGSDHDLIPWFN 118

Query: 84  GDRTIVPGAMAMDALVPSSS 25
             +      M MDALVP S+
Sbjct: 119 HHKASASATMTMDALVPCSN 138


>ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
          Length = 459

 Score =  127 bits (318), Expect = 1e-27
 Identities = 76/151 (50%), Positives = 90/151 (59%), Gaps = 20/151 (13%)
 Frame = -2

Query: 417 MSQCVPSWNLDETTTTVSLGIIQNTNMNDSKAPDVVDADLDYEVAELTWENGQLAMHGLG 238
           MSQCVPSW++++      + +  N+N   S APDV    LDYEVAELTWENGQL+MHGLG
Sbjct: 1   MSQCVPSWDVEDNPPPSRVSLRSNSN---STAPDV--PMLDYEVAELTWENGQLSMHGLG 55

Query: 237 HPRVIGKP---SSTKYTWEKPRASGTLESIVNQAAQLAPCNAP------------VHHNE 103
            PRV  KP   ++ KYTWEKPR SGTLESIVNQA   +    P            V+ N 
Sbjct: 56  LPRVPVKPPTAATNKYTWEKPRGSGTLESIVNQATSFSHQEKPRPLNGDSGGGGGVYGNF 115

Query: 102 LVPWFD-----GDRTIVPGAMAMDALVPSSS 25
           +VPWFD        T     M MDALVP S+
Sbjct: 116 MVPWFDPHAAATTTTTTTNTMTMDALVPCSN 146


>ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
          Length = 458

 Score =  124 bits (312), Expect = 6e-27
 Identities = 75/145 (51%), Positives = 87/145 (60%), Gaps = 14/145 (9%)
 Frame = -2

Query: 417 MSQCVPSWNLDETTTTVSLGIIQNTNMNDSKAPDVVDADLDYEVAELTWENGQLAMHGLG 238
           MSQCVPSW++++      + +  N+N   S APDV    LDYEVAELTWENGQL+MHGLG
Sbjct: 1   MSQCVPSWDVEDNPPPSRVSLRSNSN---STAPDV--PMLDYEVAELTWENGQLSMHGLG 55

Query: 237 HPRVIGKPS---STKYTWEKPRASGTLESIVNQAAQLAPCNAP----------VHHNELV 97
            PRV  KP    + KYTWEKPRASGTLESIVNQ         P          V+ N  V
Sbjct: 56  LPRVPVKPPTAVTNKYTWEKPRASGTLESIVNQVTSFPHRGKPTPLNGGGGGGVYGNFRV 115

Query: 96  PWFDGDRT-IVPGAMAMDALVPSSS 25
           PWFD   T      + MDALVP S+
Sbjct: 116 PWFDPHATATTTNTVTMDALVPCSN 140


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