BLASTX nr result

ID: Coptis25_contig00042759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042759
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67157.1| hypothetical protein VITISV_039493 [Vitis vinifera]    40   1e-06
emb|CAN80203.1| hypothetical protein VITISV_030059 [Vitis vinifera]    40   2e-06
emb|CAN72425.1| hypothetical protein VITISV_011055 [Vitis vinifera]    39   4e-06
emb|CAN64531.1| hypothetical protein VITISV_042967 [Vitis vinifera]    39   4e-06
ref|XP_003631805.1| PREDICTED: uncharacterized protein LOC100248...    38   8e-06

>emb|CAN67157.1| hypothetical protein VITISV_039493 [Vitis vinifera]
          Length = 845

 Score = 40.4 bits (93), Expect(2) = 1e-06
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = -2

Query: 177 VVEDHLNLNGIDLSYRVWVLHGER 106
           V+ +HL  NGIDLSYRVW  HGE+
Sbjct: 54  VIREHLFFNGIDLSYRVWYWHGEK 77



 Score = 36.6 bits (83), Expect(2) = 1e-06
 Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = -3

Query: 320 WMDEKNKRSILYEDGVRDFVSFARS-KFGGSACPCPCKNCRN 198
           WM  K++RSI Y++GV +F++FA +     ++  CPC  C N
Sbjct: 6   WMS-KDRRSIEYDEGVENFINFALAHSTNHTSIKCPCLRCGN 46


>emb|CAN80203.1| hypothetical protein VITISV_030059 [Vitis vinifera]
          Length = 772

 Score = 40.4 bits (93), Expect(2) = 2e-06
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = -2

Query: 177 VVEDHLNLNGIDLSYRVWVLHGER 106
           V+ +HL  NGIDLSYRVW  HGE+
Sbjct: 54  VIREHLFFNGIDLSYRVWYWHGEK 77



 Score = 36.2 bits (82), Expect(2) = 2e-06
 Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = -3

Query: 320 WMDEKNKRSILYEDGVRDFVSFARS-KFGGSACPCPCKNCRN 198
           WM  K++RS+ Y++GV +F++FA +     ++  CPC  C N
Sbjct: 6   WMS-KDRRSVEYDEGVENFINFALAHSTNHTSIKCPCLRCGN 46


>emb|CAN72425.1| hypothetical protein VITISV_011055 [Vitis vinifera]
          Length = 597

 Score = 39.3 bits (90), Expect(2) = 4e-06
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = -2

Query: 177 VVEDHLNLNGIDLSYRVWVLHGER 106
           V+ +HL  NGIDL+YRVW  HGE+
Sbjct: 54  VIREHLFFNGIDLNYRVWYWHGEK 77



 Score = 36.2 bits (82), Expect(2) = 4e-06
 Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = -3

Query: 320 WMDEKNKRSILYEDGVRDFVSFARS-KFGGSACPCPCKNCRN 198
           WM  K++RS+ Y++GV +F++FA +     ++  CPC  C N
Sbjct: 6   WMS-KDRRSVEYDEGVENFINFALAHSTNHTSIKCPCLRCGN 46


>emb|CAN64531.1| hypothetical protein VITISV_042967 [Vitis vinifera]
          Length = 295

 Score = 38.9 bits (89), Expect(2) = 4e-06
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = -2

Query: 177 VVEDHLNLNGIDLSYRVWVLHGER 106
           V+ +HL  NGIDLSY+VW  HGE+
Sbjct: 54  VIREHLFFNGIDLSYQVWYWHGEK 77



 Score = 36.6 bits (83), Expect(2) = 4e-06
 Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = -3

Query: 320 WMDEKNKRSILYEDGVRDFVSFARS-KFGGSACPCPCKNCRN 198
           WM  K++RSI Y++GV +F++FA +     ++  CPC  C N
Sbjct: 6   WMS-KDRRSIEYDEGVENFINFALAHSTNHTSIKCPCLRCGN 46


>ref|XP_003631805.1| PREDICTED: uncharacterized protein LOC100248429 [Vitis vinifera]
          Length = 953

 Score = 38.1 bits (87), Expect(2) = 8e-06
 Identities = 14/24 (58%), Positives = 18/24 (75%)
 Frame = -2

Query: 177 VVEDHLNLNGIDLSYRVWVLHGER 106
           V+ +H   NGID+SYRVW  HGE+
Sbjct: 54  VIREHFFFNGIDISYRVWYWHGEK 77



 Score = 36.2 bits (82), Expect(2) = 8e-06
 Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = -3

Query: 320 WMDEKNKRSILYEDGVRDFVSFARS-KFGGSACPCPCKNCRN 198
           WM  K++RS+ Y++GV +F++FA +     ++  CPC  C N
Sbjct: 6   WMS-KDRRSVEYDEGVENFINFALAHSTNHTSIKCPCLRCGN 46


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