BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042751
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_187409.2| integrator complex subunit 9 [Arabidopsis thali...   116   2e-24
ref|XP_002882534.1| hypothetical protein ARALYDRAFT_896920 [Arab...   110   9e-23
ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homo...   104   7e-21
ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator c...   103   1e-20
ref|XP_002520390.1| conserved hypothetical protein [Ricinus comm...    96   4e-18

>ref|NP_187409.2| integrator complex subunit 9 [Arabidopsis thaliana]
           gi|332641036|gb|AEE74557.1| integrator complex subunit 9
           [Arabidopsis thaliana]
          Length = 699

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/98 (57%), Positives = 70/98 (71%), Gaps = 6/98 (6%)
 Frame = +3

Query: 72  MKLTLLCKGDGYHFPPCYMLDLCGFHILLECPLDLSALKIFSPIPSHCNQLVNVETSSDE 251
           M+LT L KGDG+H+PPC+ML+LCGF IL++CPLDLSA+KIFSP+PS      + E  SDE
Sbjct: 1   MELTCLSKGDGFHYPPCHMLNLCGFRILIDCPLDLSAIKIFSPVPSGVGSEAS-EYLSDE 59

Query: 252 RM------RKKQKTERPIEAKDLICAEPWYKMVANLHL 347
            +      +KKQK ER +   DL+C EPWYK V  LHL
Sbjct: 60  SLDAQNPIQKKQKLERQLTCADLVCEEPWYKTVKALHL 97


>ref|XP_002882534.1| hypothetical protein ARALYDRAFT_896920 [Arabidopsis lyrata subsp.
           lyrata] gi|297328374|gb|EFH58793.1| hypothetical protein
           ARALYDRAFT_896920 [Arabidopsis lyrata subsp. lyrata]
          Length = 699

 Score =  110 bits (276), Expect = 9e-23
 Identities = 55/98 (56%), Positives = 68/98 (69%), Gaps = 6/98 (6%)
 Frame = +3

Query: 72  MKLTLLCKGDGYHFPPCYMLDLCGFHILLECPLDLSALKIFSPIPSHCNQLVNVETSSDE 251
           MKLT L KGDG+H+PPC+ML+LCGF IL++CPLDLSA+KIFSP+ S C      +  SDE
Sbjct: 1   MKLTCLSKGDGFHYPPCHMLNLCGFRILIDCPLDLSAIKIFSPVIS-CVASEASKYPSDE 59

Query: 252 RM------RKKQKTERPIEAKDLICAEPWYKMVANLHL 347
            +      +KK K ER +   DL+C EPWYK V  LHL
Sbjct: 60  SLDAQNPIQKKHKLERQLTFADLVCEEPWYKTVKPLHL 97


>ref|XP_002265081.2| PREDICTED: integrator complex subunit 9 homolog [Vitis vinifera]
           gi|296081277|emb|CBI17721.3| unnamed protein product
           [Vitis vinifera]
          Length = 774

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/101 (49%), Positives = 72/101 (71%), Gaps = 1/101 (0%)
 Frame = +3

Query: 48  SKKIPLPTMKLTLLCKGDGYHFPPCYMLDLCGFHILLECPLDLSALKIFSPIPSHCNQLV 227
           ++ +P   MK T L KG  ++FPPC+++ + GF ILL+CPLDLS+L IFSPIP+H     
Sbjct: 74  TRSLPSVYMKFTCLSKGGNFYFPPCHIITVSGFRILLDCPLDLSSLMIFSPIPTHA--FS 131

Query: 228 NVETSSDERM-RKKQKTERPIEAKDLICAEPWYKMVANLHL 347
           N E  S + + +K+QK ERPI++ +LI A+PW+K V +LHL
Sbjct: 132 NPELPSPDSVDQKRQKHERPIDSSELIRAQPWFKTVTSLHL 172


>ref|XP_003539241.1| PREDICTED: LOW QUALITY PROTEIN: integrator complex subunit 9-like
           [Glycine max]
          Length = 794

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/102 (52%), Positives = 68/102 (66%), Gaps = 9/102 (8%)
 Frame = +3

Query: 69  TMKLTLLCKGDGYHFPPCYMLDLCGFHILLECPLDLSALKIFSPIPSHCNQL-----VNV 233
           +MK T L KG G+HFPPC+ML+ CG  ILL+CPLDLSAL  FSP+P+  + L      N 
Sbjct: 87  SMKFTCLSKGGGFHFPPCHMLNFCGIRILLDCPLDLSALMAFSPVPTALDCLPVEESYNT 146

Query: 234 ETSS--DERM--RKKQKTERPIEAKDLICAEPWYKMVANLHL 347
           E ++  D R    K+QK E  ++AK L+ AEPWYK V NLHL
Sbjct: 147 EANAFFDSRFGSGKRQKIENLLDAKSLLFAEPWYKTVNNLHL 188


>ref|XP_002520390.1| conserved hypothetical protein [Ricinus communis]
           gi|223540437|gb|EEF42006.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 705

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/101 (46%), Positives = 67/101 (66%), Gaps = 9/101 (8%)
 Frame = +3

Query: 72  MKLTLLCKGDGYHFPPCYMLDLCGFHILLECPLDLSALKIFSPIPSHCNQLVNVE---TS 242
           MK T L KG+G+HFPPC +LD+ G+ IL +CPLDLS+L IFSP+P+    ++  E    S
Sbjct: 1   MKFTCLSKGNGFHFPPCCILDMSGYRILFDCPLDLSSLTIFSPVPADFCPILPEEHPNCS 60

Query: 243 SDERMRKKQKT------ERPIEAKDLICAEPWYKMVANLHL 347
             + +R + +T      E+P++ ++LI AEPWYK   NLHL
Sbjct: 61  LHDSLRVELETGKMWGMEKPLDVQNLIYAEPWYKTAKNLHL 101