BLASTX nr result

ID: Coptis25_contig00042742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042742
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520551.1| eukaryotic translation initiation factor 2c,...    57   2e-06
gb|AEE81036.1| argonaute 2 [Nicotiana benthamiana]                     57   2e-06
ref|XP_002332150.1| argonaute protein group [Populus trichocarpa...    55   4e-06

>ref|XP_002520551.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223540265|gb|EEF41837.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 338

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/51 (50%), Positives = 37/51 (72%)
 Frame = +2

Query: 65  RRNIEKALKGLKVMVTHRRTKQQYRVEGLTRQISRDIRFTLEEAEGSSGPK 217
           RR++E ALKGLKV VTHR TKQ+Y + GLT+  ++ I F  E+ +G + P+
Sbjct: 259 RRDVENALKGLKVSVTHRITKQKYTIVGLTKDNTQHISFAAEDPDGRAPPR 309


>gb|AEE81036.1| argonaute 2 [Nicotiana benthamiana]
          Length = 198

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = +2

Query: 65  RRNIEKALKGLKVMVTHRRTKQQYRVEGLTRQISRDIRFTLEEAEGSSGPK 217
           RR+ E AL GLKV VTHRR+ Q+Y V+ LT + +RD+ F LE+ EG   PK
Sbjct: 65  RRDAEDALVGLKVKVTHRRSSQKYVVKKLTDEKTRDLHFILEDPEGKDPPK 115


>ref|XP_002332150.1| argonaute protein group [Populus trichocarpa]
           gi|222875200|gb|EEF12331.1| argonaute protein group
           [Populus trichocarpa]
          Length = 1020

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/48 (56%), Positives = 36/48 (75%)
 Frame = +2

Query: 65  RRNIEKALKGLKVMVTHRRTKQQYRVEGLTRQISRDIRFTLEEAEGSS 208
           R ++E ALKGLKV VTHR TKQ+Y + GLTR  +RDI F+ E+ +G +
Sbjct: 400 RGDVEIALKGLKVRVTHRVTKQKYVIVGLTRDDTRDITFSQEDPDGKA 447


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