BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042706
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus ...   101   5e-20
ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like...   100   9e-20
ref|XP_001775840.1| predicted protein [Physcomitrella patens sub...   100   1e-19
ref|XP_001784126.1| predicted protein [Physcomitrella patens sub...   100   1e-19
gb|EMC89402.1| Splicing factor 3B subunit 3 [Columba livia]            99   5e-19

>ref|XP_002534515.1| spliceosomal protein sap, putative [Ricinus communis]
           gi|223525135|gb|EEF27867.1| spliceosomal protein sap,
           putative [Ricinus communis]
          Length = 1214

 Score =  101 bits (252), Expect = 5e-20
 Identities = 50/99 (50%), Positives = 73/99 (73%)
 Frame = +2

Query: 41  MYLYNLTLKPSTAISFAISGNFINTNTEQILLANNKLLQLIQLDDTANGSKFQTLISVDV 220
           MYLYNLTL+ +T I  AI+GNF    T++I++A  K+L L++ D+  N  K QT++SV++
Sbjct: 1   MYLYNLTLQRATGIITAINGNFSGGKTQEIVVARGKVLDLLRPDE--NSGKLQTILSVEI 58

Query: 221 FGTIRSLSKLSLHGNDKDYIVLSSDSGCITVLEYDSKKN 337
           FG IRSL++  L G+ KDYIV+ SDSG I +LEY+ ++N
Sbjct: 59  FGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKERN 97


>ref|XP_004147708.1| PREDICTED: splicing factor 3B subunit 3-like [Cucumis sativus]
           gi|449513493|ref|XP_004164340.1| PREDICTED: splicing
           factor 3B subunit 3-like [Cucumis sativus]
          Length = 1214

 Score =  100 bits (250), Expect = 9e-20
 Identities = 52/99 (52%), Positives = 72/99 (72%)
 Frame = +2

Query: 41  MYLYNLTLKPSTAISFAISGNFINTNTEQILLANNKLLQLIQLDDTANGSKFQTLISVDV 220
           MYLY+LTL+ +T I  AI+GNF    T++I++A  K+L LI+ DD+    K QTL+SV++
Sbjct: 1   MYLYSLTLQRATGIVSAINGNFSGGKTQEIVVARGKVLDLIRPDDSG---KIQTLLSVEI 57

Query: 221 FGTIRSLSKLSLHGNDKDYIVLSSDSGCITVLEYDSKKN 337
           FG IRSL++  L G+ KDYIV+ SDSG I +LEY+  KN
Sbjct: 58  FGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKDKN 96


>ref|XP_001775840.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162672847|gb|EDQ59379.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 1214

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/99 (52%), Positives = 73/99 (73%)
 Frame = +2

Query: 41  MYLYNLTLKPSTAISFAISGNFINTNTEQILLANNKLLQLIQLDDTANGSKFQTLISVDV 220
           M+LYNLTL+P+T I  A  GNF    +++I++A  K+L L++ DD  NG K QTL+SV++
Sbjct: 1   MFLYNLTLQPATGIVCATYGNFTGGKSQEIVVARGKVLDLLRPDD--NG-KLQTLLSVEI 57

Query: 221 FGTIRSLSKLSLHGNDKDYIVLSSDSGCITVLEYDSKKN 337
           FG IRSL++  L G+ KDYIV+ SDSG I +LEY+ +KN
Sbjct: 58  FGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKN 96


>ref|XP_001784126.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162664326|gb|EDQ51050.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 1214

 Score =  100 bits (249), Expect = 1e-19
 Identities = 53/99 (53%), Positives = 73/99 (73%)
 Frame = +2

Query: 41  MYLYNLTLKPSTAISFAISGNFINTNTEQILLANNKLLQLIQLDDTANGSKFQTLISVDV 220
           M+LY+LTL+P+T I  A  GNF    T++I++A  K+L L++ DD  NG K QTL+SV+V
Sbjct: 1   MFLYSLTLQPATGIVCATYGNFTGGKTQEIVVARGKVLDLLRPDD--NG-KLQTLLSVEV 57

Query: 221 FGTIRSLSKLSLHGNDKDYIVLSSDSGCITVLEYDSKKN 337
           FG IRSL++  L G+ KDYIV+ SDSG I +LEY+ +KN
Sbjct: 58  FGAIRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKN 96


>gb|EMC89402.1| Splicing factor 3B subunit 3 [Columba livia]
          Length = 1225

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/99 (51%), Positives = 68/99 (68%)
 Frame = +2

Query: 41  MYLYNLTLKPSTAISFAISGNFINTNTEQILLANNKLLQLIQLDDTANGSKFQTLISVDV 220
           M+LYNLTL+ +T ISFAI GNF  T  ++I+++  K+L+L++ D   N  K  TL++V+V
Sbjct: 1   MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDP--NTGKVHTLLTVEV 58

Query: 221 FGTIRSLSKLSLHGNDKDYIVLSSDSGCITVLEYDSKKN 337
           FG IRSL    L G  KDYIV+ SDSG I +LEY   KN
Sbjct: 59  FGVIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKN 97