BLASTX nr result

ID: Coptis25_contig00042695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042695
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509706.1| multidrug resistance pump, putative [Ricinus...   186   2e-45
ref|XP_002274808.1| PREDICTED: multidrug and toxin extrusion pro...   183   1e-44
ref|XP_002276226.1| PREDICTED: multidrug and toxin extrusion pro...   182   3e-44
ref|XP_002318258.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
ref|XP_002303561.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43

>ref|XP_002509706.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223549605|gb|EEF51093.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 539

 Score =  186 bits (472), Expect = 2e-45
 Identities = 84/97 (86%), Positives = 91/97 (93%)
 Frame = -3

Query: 292 ITLPLTYCATLSILLHIPINYFLVSVLNLGIKGVALSGVWTNFNLVGSLIIYIYVSGVYK 113
           ITLPLT+CA LSILLHIPINYFLVSVLNLGIKGVALSG+WTNFNLV SLIIY+  SGVYK
Sbjct: 209 ITLPLTFCAALSILLHIPINYFLVSVLNLGIKGVALSGIWTNFNLVASLIIYVLFSGVYK 268

Query: 112 KTWGGLTTDCVKGWKSLLNLAIPSCISVCLEWWWYEI 2
           KTW G++++C KGWKSLLNLAIPSCISVCLEWWWYEI
Sbjct: 269 KTWSGISSECFKGWKSLLNLAIPSCISVCLEWWWYEI 305


>ref|XP_002274808.1| PREDICTED: multidrug and toxin extrusion protein 2-like [Vitis
           vinifera]
          Length = 534

 Score =  183 bits (465), Expect = 1e-44
 Identities = 81/97 (83%), Positives = 91/97 (93%)
 Frame = -3

Query: 292 ITLPLTYCATLSILLHIPINYFLVSVLNLGIKGVALSGVWTNFNLVGSLIIYIYVSGVYK 113
           ITLPLT+CAT+SI +HIPINY LVS LNLGIKGVALSGVWTNFNLVGSLIIY+ +SGVYK
Sbjct: 206 ITLPLTFCATMSIFMHIPINYLLVSHLNLGIKGVALSGVWTNFNLVGSLIIYLLISGVYK 265

Query: 112 KTWGGLTTDCVKGWKSLLNLAIPSCISVCLEWWWYEI 2
           KTWGGL+ +C++GWK LLNLA+PSCISVCLEWWWYEI
Sbjct: 266 KTWGGLSMECLRGWKPLLNLAVPSCISVCLEWWWYEI 302


>ref|XP_002276226.1| PREDICTED: multidrug and toxin extrusion protein 1-like [Vitis
           vinifera]
          Length = 530

 Score =  182 bits (461), Expect = 3e-44
 Identities = 81/97 (83%), Positives = 92/97 (94%)
 Frame = -3

Query: 292 ITLPLTYCATLSILLHIPINYFLVSVLNLGIKGVALSGVWTNFNLVGSLIIYIYVSGVYK 113
           ITLPLTYCATL+ILLHIPINYFLVSVL+LGIKGVALSG+WTN NLVGSLI Y+ VS VYK
Sbjct: 212 ITLPLTYCATLAILLHIPINYFLVSVLDLGIKGVALSGIWTNLNLVGSLIAYVVVSRVYK 271

Query: 112 KTWGGLTTDCVKGWKSLLNLAIPSCISVCLEWWWYEI 2
           KTWGG++++C++ WKSLLNLA+PSCISVCLEWWWYEI
Sbjct: 272 KTWGGVSSECLRDWKSLLNLAVPSCISVCLEWWWYEI 308


>ref|XP_002318258.1| predicted protein [Populus trichocarpa] gi|222858931|gb|EEE96478.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  180 bits (456), Expect = 1e-43
 Identities = 82/97 (84%), Positives = 90/97 (92%)
 Frame = -3

Query: 292 ITLPLTYCATLSILLHIPINYFLVSVLNLGIKGVALSGVWTNFNLVGSLIIYIYVSGVYK 113
           ITLPLT+CATL+I+LHIPINYFLV+ LNLG KGVALSGVWTNFNLVGSLIIYI VSGV+K
Sbjct: 156 ITLPLTFCATLAIILHIPINYFLVTHLNLGTKGVALSGVWTNFNLVGSLIIYILVSGVHK 215

Query: 112 KTWGGLTTDCVKGWKSLLNLAIPSCISVCLEWWWYEI 2
           KTWGG + +C K WK+LLNLAIPSCISVCLEWWWYEI
Sbjct: 216 KTWGGFSMECFKEWKTLLNLAIPSCISVCLEWWWYEI 252


>ref|XP_002303561.1| predicted protein [Populus trichocarpa] gi|222840993|gb|EEE78540.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score =  179 bits (455), Expect = 2e-43
 Identities = 79/97 (81%), Positives = 90/97 (92%)
 Frame = -3

Query: 292 ITLPLTYCATLSILLHIPINYFLVSVLNLGIKGVALSGVWTNFNLVGSLIIYIYVSGVYK 113
           ITLPLT+CATLSILLHIP+NY LVSV NLGIKGVAL  VWTNF+LVGSL+IY+ +SGV K
Sbjct: 150 ITLPLTFCATLSILLHIPVNYLLVSVFNLGIKGVALGAVWTNFSLVGSLVIYVMISGVSK 209

Query: 112 KTWGGLTTDCVKGWKSLLNLAIPSCISVCLEWWWYEI 2
           KTWGG++ +C+KGW+SLLNLAIPSCISVCLEWWWYEI
Sbjct: 210 KTWGGISLECLKGWRSLLNLAIPSCISVCLEWWWYEI 246


Top