BLASTX nr result

ID: Coptis25_contig00042691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042691
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    55   4e-06

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 28/62 (45%), Positives = 37/62 (59%)
 Frame = -2

Query: 294  KICHMNLSKASGCHCWGSPFGWLVVLGLDSQFHLLNPLSGVWFSLPSLSKYRDRSCLGLS 115
            K+  + L +  G  CWGSP+GWLV +G D    LLNPL+ V   LPSL     R+C  L+
Sbjct: 992  KVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRVQILLPSL-----RACPNLN 1046

Query: 114  SL 109
            +L
Sbjct: 1047 TL 1048


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