BLASTX nr result

ID: Coptis25_contig00042681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042681
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279325.2| PREDICTED: rho guanine nucleotide exchange f...    55   5e-06
emb|CBI36126.3| unnamed protein product [Vitis vinifera]               55   5e-06

>ref|XP_002279325.2| PREDICTED: rho guanine nucleotide exchange factor 8-like [Vitis
           vinifera]
          Length = 542

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = +3

Query: 48  NEMPMSKPLKVATNKKVSYIEKLETLGGLRSPRARH 155
           +E PM+K   + TNKKVSYIEKLE LGGLRSP ARH
Sbjct: 507 DEKPMTKIANIITNKKVSYIEKLENLGGLRSPTARH 542


>emb|CBI36126.3| unnamed protein product [Vitis vinifera]
          Length = 434

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = +3

Query: 48  NEMPMSKPLKVATNKKVSYIEKLETLGGLRSPRARH 155
           +E PM+K   + TNKKVSYIEKLE LGGLRSP ARH
Sbjct: 399 DEKPMTKIANIITNKKVSYIEKLENLGGLRSPTARH 434


Top