BLASTX nr result

ID: Coptis25_contig00042672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042672
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532015.1| ATP-binding cassette transporter, putative [...   207   5e-52
ref|XP_003633488.1| PREDICTED: pleiotropic drug resistance prote...   206   2e-51
ref|XP_003633487.1| PREDICTED: pleiotropic drug resistance prote...   206   2e-51
ref|XP_002267345.2| PREDICTED: pleiotropic drug resistance prote...   206   2e-51
ref|XP_003633486.1| PREDICTED: pleiotropic drug resistance prote...   206   2e-51

>ref|XP_002532015.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223528327|gb|EEF30370.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 1211

 Score =  207 bits (528), Expect = 5e-52
 Identities = 95/118 (80%), Positives = 111/118 (94%)
 Frame = -3

Query: 355 KCNSFIYIFKTVQITIMSLICMTVFLRTEMKAGQIQDGGKYFGALFFSLINVMFNGLAEL 176
           K NSF+YIFKT QITIMSLI MTVFLRTEMK G IQDGGK++GALFFSLINVMFNG+AE+
Sbjct: 322 KRNSFVYIFKTTQITIMSLIAMTVFLRTEMKVGGIQDGGKFYGALFFSLINVMFNGMAEM 381

Query: 175 SLTIFKLPVFYKQRDFLFYPPWAFALPIWVLKNPLSLMESGIWVILTYYTVGFAPSAS 2
           ++T+F+LPVFYKQRDFLFYP WAFALPIWVL+ P+SL+ESGIW++LTYYT+GFAP+AS
Sbjct: 382 AMTMFRLPVFYKQRDFLFYPAWAFALPIWVLRIPISLLESGIWILLTYYTIGFAPAAS 439


>ref|XP_003633488.1| PREDICTED: pleiotropic drug resistance protein 2-like isoform 4
           [Vitis vinifera]
          Length = 1438

 Score =  206 bits (524), Expect = 2e-51
 Identities = 97/118 (82%), Positives = 110/118 (93%)
 Frame = -3

Query: 355 KCNSFIYIFKTVQITIMSLICMTVFLRTEMKAGQIQDGGKYFGALFFSLINVMFNGLAEL 176
           K NSFIYIFKT QITIMS+I MTVF RTEMK GQ+QDG K++GALF+SLINVMFNG+AEL
Sbjct: 530 KRNSFIYIFKTTQITIMSVIAMTVFFRTEMKHGQLQDGVKFYGALFYSLINVMFNGMAEL 589

Query: 175 SLTIFKLPVFYKQRDFLFYPPWAFALPIWVLKNPLSLMESGIWVILTYYTVGFAPSAS 2
           +LT+F+LPVF+KQRDFLFYP WAFALPIWVL+ PLSLMESGIW+ILTYYT+GFAPSAS
Sbjct: 590 ALTLFRLPVFFKQRDFLFYPAWAFALPIWVLRIPLSLMESGIWIILTYYTIGFAPSAS 647


>ref|XP_003633487.1| PREDICTED: pleiotropic drug resistance protein 2-like isoform 3
           [Vitis vinifera]
          Length = 1437

 Score =  206 bits (524), Expect = 2e-51
 Identities = 97/118 (82%), Positives = 110/118 (93%)
 Frame = -3

Query: 355 KCNSFIYIFKTVQITIMSLICMTVFLRTEMKAGQIQDGGKYFGALFFSLINVMFNGLAEL 176
           K NSFIYIFKT QITIMS+I MTVF RTEMK GQ+QDG K++GALF+SLINVMFNG+AEL
Sbjct: 535 KRNSFIYIFKTTQITIMSVIAMTVFFRTEMKHGQLQDGVKFYGALFYSLINVMFNGMAEL 594

Query: 175 SLTIFKLPVFYKQRDFLFYPPWAFALPIWVLKNPLSLMESGIWVILTYYTVGFAPSAS 2
           +LT+F+LPVF+KQRDFLFYP WAFALPIWVL+ PLSLMESGIW+ILTYYT+GFAPSAS
Sbjct: 595 ALTLFRLPVFFKQRDFLFYPAWAFALPIWVLRIPLSLMESGIWIILTYYTIGFAPSAS 652


>ref|XP_002267345.2| PREDICTED: pleiotropic drug resistance protein 2-like isoform 1
           [Vitis vinifera]
          Length = 1449

 Score =  206 bits (524), Expect = 2e-51
 Identities = 97/118 (82%), Positives = 110/118 (93%)
 Frame = -3

Query: 355 KCNSFIYIFKTVQITIMSLICMTVFLRTEMKAGQIQDGGKYFGALFFSLINVMFNGLAEL 176
           K NSFIYIFKT QITIMS+I MTVF RTEMK GQ+QDG K++GALF+SLINVMFNG+AEL
Sbjct: 535 KRNSFIYIFKTTQITIMSVIAMTVFFRTEMKHGQLQDGVKFYGALFYSLINVMFNGMAEL 594

Query: 175 SLTIFKLPVFYKQRDFLFYPPWAFALPIWVLKNPLSLMESGIWVILTYYTVGFAPSAS 2
           +LT+F+LPVF+KQRDFLFYP WAFALPIWVL+ PLSLMESGIW+ILTYYT+GFAPSAS
Sbjct: 595 ALTLFRLPVFFKQRDFLFYPAWAFALPIWVLRIPLSLMESGIWIILTYYTIGFAPSAS 652


>ref|XP_003633486.1| PREDICTED: pleiotropic drug resistance protein 2-like isoform 2
           [Vitis vinifera]
          Length = 1442

 Score =  206 bits (524), Expect = 2e-51
 Identities = 97/118 (82%), Positives = 110/118 (93%)
 Frame = -3

Query: 355 KCNSFIYIFKTVQITIMSLICMTVFLRTEMKAGQIQDGGKYFGALFFSLINVMFNGLAEL 176
           K NSFIYIFKT QITIMS+I MTVF RTEMK GQ+QDG K++GALF+SLINVMFNG+AEL
Sbjct: 535 KRNSFIYIFKTTQITIMSVIAMTVFFRTEMKHGQLQDGVKFYGALFYSLINVMFNGMAEL 594

Query: 175 SLTIFKLPVFYKQRDFLFYPPWAFALPIWVLKNPLSLMESGIWVILTYYTVGFAPSAS 2
           +LT+F+LPVF+KQRDFLFYP WAFALPIWVL+ PLSLMESGIW+ILTYYT+GFAPSAS
Sbjct: 595 ALTLFRLPVFFKQRDFLFYPAWAFALPIWVLRIPLSLMESGIWIILTYYTIGFAPSAS 652


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