BLASTX nr result

ID: Coptis25_contig00042664 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042664
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34149.3| unnamed protein product [Vitis vinifera]              184   8e-45
ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera]    184   8e-45
ref|NP_173839.1| AAA-type ATPase-like protein [Arabidopsis thali...   177   8e-43
dbj|BAC42817.1| unknown protein [Arabidopsis thaliana]                177   8e-43
ref|XP_002890715.1| AAA-type ATPase family protein [Arabidopsis ...   177   8e-43

>emb|CBI34149.3| unnamed protein product [Vitis vinifera]
          Length = 397

 Score =  184 bits (466), Expect = 8e-45
 Identities = 94/124 (75%), Positives = 102/124 (82%), Gaps = 6/124 (4%)
 Frame = +2

Query: 2   EGGEHPLYIARRLVRFASEDVGLGDPNALCQAVACYQACHFLGMPECNVNLAQCVAYLAL 181
           EGGE PLYIARRL+RFASEDVGL DP AL QAVAC QACHFLGMPECNVNLAQCVAYLAL
Sbjct: 263 EGGEEPLYIARRLIRFASEDVGLADPIALVQAVACCQACHFLGMPECNVNLAQCVAYLAL 322

Query: 182 APKSIAVYQAIETAMKVVKDSGGQNEGVPLHLRNAATKLM------KGHICPPHNHSISP 343
           APKS++VY+AI  A +VV++S GQNEGVPLHLRNA TKLM      KG+I PP N S S 
Sbjct: 323 APKSVSVYRAILAAQEVVRESVGQNEGVPLHLRNAPTKLMKELGYGKGYIYPPDNPSSST 382

Query: 344 QTYL 355
           Q YL
Sbjct: 383 QNYL 386


>ref|XP_002264062.1| PREDICTED: ATPase WRNIP1-like [Vitis vinifera]
          Length = 534

 Score =  184 bits (466), Expect = 8e-45
 Identities = 94/124 (75%), Positives = 102/124 (82%), Gaps = 6/124 (4%)
 Frame = +2

Query: 2   EGGEHPLYIARRLVRFASEDVGLGDPNALCQAVACYQACHFLGMPECNVNLAQCVAYLAL 181
           EGGE PLYIARRL+RFASEDVGL DP AL QAVAC QACHFLGMPECNVNLAQCVAYLAL
Sbjct: 400 EGGEEPLYIARRLIRFASEDVGLADPIALVQAVACCQACHFLGMPECNVNLAQCVAYLAL 459

Query: 182 APKSIAVYQAIETAMKVVKDSGGQNEGVPLHLRNAATKLM------KGHICPPHNHSISP 343
           APKS++VY+AI  A +VV++S GQNEGVPLHLRNA TKLM      KG+I PP N S S 
Sbjct: 460 APKSVSVYRAILAAQEVVRESVGQNEGVPLHLRNAPTKLMKELGYGKGYIYPPDNPSSST 519

Query: 344 QTYL 355
           Q YL
Sbjct: 520 QNYL 523


>ref|NP_173839.1| AAA-type ATPase-like protein [Arabidopsis thaliana]
           gi|2829884|gb|AAC00592.1| Hypothetical protein
           [Arabidopsis thaliana] gi|332192391|gb|AEE30512.1|
           AAA-type ATPase-like protein [Arabidopsis thaliana]
          Length = 525

 Score =  177 bits (449), Expect = 8e-43
 Identities = 94/125 (75%), Positives = 101/125 (80%), Gaps = 7/125 (5%)
 Frame = +2

Query: 2   EGGEHPLYIARRLVRFASEDVGLGDPNALCQAVACYQACHFLGMPECNVNLAQCVAYLAL 181
           EGGE PLYIARRL+RFASED+GL DP+AL QAVACYQA HFLGMPECNV LAQC AYLAL
Sbjct: 374 EGGEEPLYIARRLIRFASEDIGLADPSALTQAVACYQASHFLGMPECNVILAQCTAYLAL 433

Query: 182 APKSIAVYQAIETAMKVVKDSGGQNEGVPLHLRNAATKLM------KGHICPPHN-HSIS 340
           APKSIAVY+AI  A KVVKDS GQNEGVPLHLRNA TKLM      K +I PP +  S +
Sbjct: 434 APKSIAVYRAIGAAQKVVKDSVGQNEGVPLHLRNAPTKLMKELGYGKEYIYPPSDPSSAA 493

Query: 341 PQTYL 355
            QTYL
Sbjct: 494 GQTYL 498


>dbj|BAC42817.1| unknown protein [Arabidopsis thaliana]
          Length = 525

 Score =  177 bits (449), Expect = 8e-43
 Identities = 94/125 (75%), Positives = 101/125 (80%), Gaps = 7/125 (5%)
 Frame = +2

Query: 2   EGGEHPLYIARRLVRFASEDVGLGDPNALCQAVACYQACHFLGMPECNVNLAQCVAYLAL 181
           EGGE PLYIARRL+RFASED+GL DP+AL QAVACYQA HFLGMPECNV LAQC AYLAL
Sbjct: 374 EGGEEPLYIARRLIRFASEDIGLADPSALTQAVACYQASHFLGMPECNVILAQCTAYLAL 433

Query: 182 APKSIAVYQAIETAMKVVKDSGGQNEGVPLHLRNAATKLM------KGHICPPHN-HSIS 340
           APKSIAVY+AI  A KVVKDS GQNEGVPLHLRNA TKLM      K +I PP +  S +
Sbjct: 434 APKSIAVYRAIGAAQKVVKDSVGQNEGVPLHLRNAPTKLMKELGYGKEYIYPPSDPSSAA 493

Query: 341 PQTYL 355
            QTYL
Sbjct: 494 GQTYL 498


>ref|XP_002890715.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297336557|gb|EFH66974.1| AAA-type ATPase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 525

 Score =  177 bits (449), Expect = 8e-43
 Identities = 93/125 (74%), Positives = 101/125 (80%), Gaps = 7/125 (5%)
 Frame = +2

Query: 2   EGGEHPLYIARRLVRFASEDVGLGDPNALCQAVACYQACHFLGMPECNVNLAQCVAYLAL 181
           EGGE PLYIARRL+RFASED+GL DP+AL QAVACYQA HFLGMPECNV LAQC AYLAL
Sbjct: 374 EGGEEPLYIARRLIRFASEDIGLADPSALTQAVACYQASHFLGMPECNVILAQCTAYLAL 433

Query: 182 APKSIAVYQAIETAMKVVKDSGGQNEGVPLHLRNAATKLM------KGHICPPHN-HSIS 340
           APKS+AVY+AI  A KVVKDS GQNEGVPLHLRNA TKLM      K +I PP +  S +
Sbjct: 434 APKSVAVYRAIGAAQKVVKDSVGQNEGVPLHLRNAPTKLMKELGYGKEYIYPPDDPSSAA 493

Query: 341 PQTYL 355
            QTYL
Sbjct: 494 AQTYL 498


Top