BLASTX nr result

ID: Coptis25_contig00042659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042659
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002836102.1| chloroplast envelope membrane protein [Megal...   139   2e-31
ref|YP_004564384.1| chloroplast envelope membrane protein (chlor...   138   4e-31
ref|YP_588129.1| envelope membrane protein [Helianthus annuus] g...   138   4e-31
ref|YP_003933972.1| chloroplast envelope membrane protein [Eucal...   138   5e-31
ref|YP_004841795.1| chloroplast envelope membrane protein [Cucum...   137   7e-31

>ref|YP_002836102.1| chloroplast envelope membrane protein [Megaleranthis saniculifolia]
           gi|226933894|gb|ACO92027.1| chloroplast envelope
           membrane protein [Megaleranthis saniculifolia]
          Length = 229

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/66 (98%), Positives = 65/66 (98%)
 Frame = +2

Query: 2   FHSPHGWELMIGFVYKDFGFSHNNQIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVVI 181
           FHSPHGWELMIG VYKDFGFSHNNQIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVVI
Sbjct: 164 FHSPHGWELMIGSVYKDFGFSHNNQIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVVI 223

Query: 182 YHSMND 199
           YHSMND
Sbjct: 224 YHSMND 229


>ref|YP_004564384.1| chloroplast envelope membrane protein (chloroplast) [Ageratina
           adenophora] gi|334089685|gb|AEG64568.1| chloroplast
           envelope membrane protein (chloroplast) [Ageratina
           adenophora]
          Length = 229

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/66 (96%), Positives = 65/66 (98%)
 Frame = +2

Query: 2   FHSPHGWELMIGFVYKDFGFSHNNQIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVVI 181
           FHSPHGWELMIGFVYKDFGF HN+QIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVVI
Sbjct: 164 FHSPHGWELMIGFVYKDFGFVHNDQIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVVI 223

Query: 182 YHSMND 199
           YHSMND
Sbjct: 224 YHSMND 229


>ref|YP_588129.1| envelope membrane protein [Helianthus annuus]
           gi|122179569|sp|Q1KXU7.1|CEMA_HELAN RecName:
           Full=Chloroplast envelope membrane protein
           gi|88656907|gb|ABD47158.1| chloroplast envelope membrane
           protein [Helianthus annuus]
          Length = 229

 Score =  138 bits (348), Expect = 4e-31
 Identities = 64/66 (96%), Positives = 65/66 (98%)
 Frame = +2

Query: 2   FHSPHGWELMIGFVYKDFGFSHNNQIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVVI 181
           FHSPHGWELMIGFVYKDFGF HN+QIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVVI
Sbjct: 164 FHSPHGWELMIGFVYKDFGFVHNDQIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVVI 223

Query: 182 YHSMND 199
           YHSMND
Sbjct: 224 YHSMND 229


>ref|YP_003933972.1| chloroplast envelope membrane protein [Eucalyptus grandis]
           gi|308223293|gb|ADO23601.1| chloroplast envelope
           membrane protein [Eucalyptus grandis]
          Length = 229

 Score =  138 bits (347), Expect = 5e-31
 Identities = 62/66 (93%), Positives = 66/66 (100%)
 Frame = +2

Query: 2   FHSPHGWELMIGFVYKDFGFSHNNQIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVVI 181
           FHSPHGWELMIG+VYKDFGF+HN+QIISGLVSTFPVILDTILKYWIFRYLNR+SPSLVVI
Sbjct: 164 FHSPHGWELMIGYVYKDFGFAHNDQIISGLVSTFPVILDTILKYWIFRYLNRISPSLVVI 223

Query: 182 YHSMND 199
           YHSMND
Sbjct: 224 YHSMND 229


>ref|YP_004841795.1| chloroplast envelope membrane protein [Cucumis melo subsp. melo]
           gi|344030503|gb|AEM76904.1| chloroplast envelope
           membrane protein [Cucumis melo subsp. melo]
          Length = 229

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/66 (96%), Positives = 65/66 (98%)
 Frame = +2

Query: 2   FHSPHGWELMIGFVYKDFGFSHNNQIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVVI 181
           FHSPHGWELMIG VYKDFGFSHN+QIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVVI
Sbjct: 164 FHSPHGWELMIGSVYKDFGFSHNDQIISGLVSTFPVILDTILKYWIFRYLNRVSPSLVVI 223

Query: 182 YHSMND 199
           YHSMND
Sbjct: 224 YHSMND 229


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