BLASTX nr result

ID: Coptis25_contig00042658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042658
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR67407.1| integrase [Cucumis melo subsp. melo]                    63   2e-08
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    59   3e-07
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]    59   4e-07
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]    59   5e-07
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    59   5e-07

>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
          Length = 1281

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/53 (54%), Positives = 41/53 (77%)
 Frame = +3

Query: 3   KLLRSLPTKFDHVVAAIGEAKDLSTLTLHELMRSLEAHEQRMSKFSSLPLEQF 161
           K+LRS+P KF+H+V AI E+KDLSTL+++ LM SL++HE R+ +F   P E F
Sbjct: 162 KILRSMPRKFEHIVVAIEESKDLSTLSINSLMGSLQSHELRLKQFDVNPEEAF 214


>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101216349 [Cucumis sativus]
          Length = 1830

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/52 (50%), Positives = 40/52 (76%)
 Frame = +3

Query: 3   KLLRSLPTKFDHVVAAIGEAKDLSTLTLHELMRSLEAHEQRMSKFSSLPLEQ 158
           K+LRS+  +++H+V AI E+KDLSTL+++ LM SL++HE R+  F S P E+
Sbjct: 160 KILRSMTRRYEHIVVAIEESKDLSTLSINSLMGSLQSHELRLKMFDSTPSEE 211


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/44 (65%), Positives = 36/44 (81%)
 Frame = +3

Query: 3   KLLRSLPTKFDHVVAAIGEAKDLSTLTLHELMRSLEAHEQRMSK 134
           K+LRSL  KFDHVVAAI E+KDLST +  ELM SL++HE R+S+
Sbjct: 131 KVLRSLTPKFDHVVAAIEESKDLSTYSFDELMGSLQSHEXRLSR 174


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/44 (65%), Positives = 36/44 (81%)
 Frame = +3

Query: 3   KLLRSLPTKFDHVVAAIGEAKDLSTLTLHELMRSLEAHEQRMSK 134
           K+LRSL  KFDHVVAAI E+KDLST +  ELM SL++HE R+S+
Sbjct: 145 KVLRSLTPKFDHVVAAIEESKDLSTYSFDELMGSLQSHEVRLSR 188


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/44 (65%), Positives = 36/44 (81%)
 Frame = +3

Query: 3   KLLRSLPTKFDHVVAAIGEAKDLSTLTLHELMRSLEAHEQRMSK 134
           K+LRSL  KFDHVVAAI E+KDLST +  ELM SL++HE R+S+
Sbjct: 158 KVLRSLTPKFDHVVAAIEESKDLSTYSFDELMGSLQSHEVRLSR 201


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