BLASTX nr result

ID: Coptis25_contig00042650 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042650
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316406.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-29
ref|XP_002283136.1| PREDICTED: uncharacterized protein LOC100244...   124   6e-27
ref|XP_003520691.1| PREDICTED: uncharacterized protein LOC100794...   121   7e-26
ref|XP_003542592.1| PREDICTED: uncharacterized protein LOC100786...   121   7e-26
ref|XP_003537061.1| PREDICTED: uncharacterized protein LOC100780...   120   1e-25

>ref|XP_002316406.1| predicted protein [Populus trichocarpa] gi|222865446|gb|EEF02577.1|
           predicted protein [Populus trichocarpa]
          Length = 108

 Score =  133 bits (334), Expect = 2e-29
 Identities = 62/94 (65%), Positives = 71/94 (75%)
 Frame = +2

Query: 131 MADKISWHCIXXXXXXXXXSCCDSSETKSSLMMNQGMANNRPCDEIYVVADGETLHTISE 310
           MA+KISW+C          SCC+ SET+ S + +     N+PCDEIYVV +GETL+TISE
Sbjct: 1   MAEKISWYCALLMALMLVLSCCEVSETELSTVGHPRFFENKPCDEIYVVREGETLNTISE 60

Query: 311 KCSDPYIVEENPHIHDPDDVFPGLVIKITPFIVR 412
           KC DPYIVEENPHIHDPDDVFPGLVIKITP I R
Sbjct: 61  KCGDPYIVEENPHIHDPDDVFPGLVIKITPLIDR 94


>ref|XP_002283136.1| PREDICTED: uncharacterized protein LOC100244252 [Vitis vinifera]
          Length = 104

 Score =  124 bits (312), Expect = 6e-27
 Identities = 60/102 (58%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
 Frame = +2

Query: 110 SSTTKATMADKISWHCIXXXXXXXXXSCCDSSETKSSLMMNQGMAN-NRPCDEIYVVADG 286
           SS+T+  +A+KISW+           SCC+S+++   +M+     +  +PCDEIYVV +G
Sbjct: 5   SSSTE--LAEKISWYSALLLALMLVLSCCESAQSHDEIMVRLHKKDAKKPCDEIYVVREG 62

Query: 287 ETLHTISEKCSDPYIVEENPHIHDPDDVFPGLVIKITPFIVR 412
           ETLHTISEKC DPYIVEENPHIHDPDDVFPGLVIKITP+  R
Sbjct: 63  ETLHTISEKCGDPYIVEENPHIHDPDDVFPGLVIKITPYNYR 104


>ref|XP_003520691.1| PREDICTED: uncharacterized protein LOC100794241 [Glycine max]
          Length = 99

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/99 (60%), Positives = 70/99 (70%), Gaps = 5/99 (5%)
 Frame = +2

Query: 131 MADKISWHCIXXXXXXXXXSCCDSS--ETKSSLMMNQGMANN---RPCDEIYVVADGETL 295
           MA+KISW C+         SCC+SS  E +  ++M + + NN   + CDEIYVV +GETL
Sbjct: 1   MAEKISWCCVLFMAIILVLSCCESSTNEFRVQMLMQRNINNNNNKKACDEIYVVREGETL 60

Query: 296 HTISEKCSDPYIVEENPHIHDPDDVFPGLVIKITPFIVR 412
            TISEKC DPYIVEENPHI DPDDVFPGLVIKI PF  R
Sbjct: 61  QTISEKCGDPYIVEENPHIQDPDDVFPGLVIKINPFTNR 99


>ref|XP_003542592.1| PREDICTED: uncharacterized protein LOC100786697 [Glycine max]
          Length = 108

 Score =  121 bits (303), Expect = 7e-26
 Identities = 59/102 (57%), Positives = 72/102 (70%), Gaps = 4/102 (3%)
 Frame = +2

Query: 119 TKATMADKISWHCIXXXXXXXXXSCCDS--SETKSSLMMNQGMAN--NRPCDEIYVVADG 286
           +   MA+KISW+C          S C+S  S+  + +M ++ ++N  N+ CDEIYVV +G
Sbjct: 6   SSTAMAEKISWNCAVFVALMLVLSSCESNTSDFTTQMMFHESVSNSNNKACDEIYVVREG 65

Query: 287 ETLHTISEKCSDPYIVEENPHIHDPDDVFPGLVIKITPFIVR 412
           ETL TISEKC DPYIVEENPHIHDPDDVFPGLVIKI PF  R
Sbjct: 66  ETLQTISEKCGDPYIVEENPHIHDPDDVFPGLVIKINPFTNR 107


>ref|XP_003537061.1| PREDICTED: uncharacterized protein LOC100780595 [Glycine max]
          Length = 206

 Score =  120 bits (300), Expect = 1e-25
 Identities = 60/106 (56%), Positives = 72/106 (67%), Gaps = 8/106 (7%)
 Frame = +2

Query: 119 TKATMADKISWHCIXXXXXXXXXSCCDS--SETKSSLMMNQGMA------NNRPCDEIYV 274
           +  T+A+KISW+C          S C+S  S+  S +M++  +       NN+ CDEIYV
Sbjct: 6   SSTTLAEKISWNCSVFVALMLVLSSCESNTSDFTSQMMLHGSVTGNISNNNNKACDEIYV 65

Query: 275 VADGETLHTISEKCSDPYIVEENPHIHDPDDVFPGLVIKITPFIVR 412
           V +GETL TISEKC DPYIVEENPHIHDPDDVFPGLVIKI PF  R
Sbjct: 66  VREGETLQTISEKCGDPYIVEENPHIHDPDDVFPGLVIKINPFTNR 111


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