BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042643
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317123.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-19
ref|XP_003573024.1| PREDICTED: rhamnogalacturonate lyase B-like ...    50   1e-11
gb|ABI15897.1| putative rhamnogalacturonate lyase [Triticum dico...    49   1e-10
gb|AAB60743.1| F21M12.30 gene product [Arabidopsis thaliana]           49   2e-10
ref|XP_002301113.1| predicted protein [Populus trichocarpa] gi|2...    51   2e-10

>ref|XP_002317123.1| predicted protein [Populus trichocarpa] gi|222860188|gb|EEE97735.1|
           predicted protein [Populus trichocarpa]
          Length = 650

 Score = 62.0 bits (149), Expect(2) = 4e-19
 Identities = 27/42 (64%), Positives = 33/42 (78%)
 Frame = -2

Query: 126 QITVNHRFVSGALIPAKSAYVGLSVARTEGGWEVESKGYQFW 1
           ++ V  RFVS +LIPAK+AYVGLS AR +G W+ ESK YQFW
Sbjct: 338 RLFVQERFVSESLIPAKNAYVGLSTARAQGAWQTESKDYQFW 379



 Score = 57.4 bits (137), Expect(2) = 4e-19
 Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 13/75 (17%)
 Frame = -1

Query: 382 VICNYHEIKQLHADFAPGFVFM-------------VYGSS*RLLEVSTWPYSFVSSPYFL 242
           ++  + E +     F P FV++             +     RLLE +TWPY FVSSPY+L
Sbjct: 268 IVAQFQEGEAWRKVFGPFFVYLNSTSNVSDAYNLWIDAKKQRLLEEATWPYEFVSSPYYL 327

Query: 241 AAKERGSASGRLLVQ 197
            AKERGSA+ RL VQ
Sbjct: 328 NAKERGSATARLFVQ 342


>ref|XP_003573024.1| PREDICTED: rhamnogalacturonate lyase B-like [Brachypodium
           distachyon]
          Length = 698

 Score = 50.4 bits (119), Expect(2) = 1e-11
 Identities = 22/42 (52%), Positives = 28/42 (66%)
 Frame = -2

Query: 126 QITVNHRFVSGALIPAKSAYVGLSVARTEGGWEVESKGYQFW 1
           ++ V  R+VSG  +PA+ AYVGL+     G W  ESKGYQFW
Sbjct: 375 RLLVRDRYVSGNDMPARLAYVGLAAPGQPGSWATESKGYQFW 416



 Score = 43.5 bits (101), Expect(2) = 1e-11
 Identities = 21/33 (63%), Positives = 24/33 (72%)
 Frame = -1

Query: 289 EVSTWPYSFVSSPYFLAAKERGSASGRLLVQGK 191
           EVS WPYSF  SP F  A ERGS +GRLLV+ +
Sbjct: 349 EVSKWPYSFPVSPDFHKAVERGSVTGRLLVRDR 381


>gb|ABI15897.1| putative rhamnogalacturonate lyase [Triticum dicoccoides]
          Length = 629

 Score = 48.9 bits (115), Expect(2) = 1e-10
 Identities = 21/42 (50%), Positives = 28/42 (66%)
 Frame = -2

Query: 126 QITVNHRFVSGALIPAKSAYVGLSVARTEGGWEVESKGYQFW 1
           ++ V  R+VS   +PA++AYVGL+     G W  ESKGYQFW
Sbjct: 332 RLLVRDRYVSRDNMPARAAYVGLAAPGQPGSWATESKGYQFW 373



 Score = 41.6 bits (96), Expect(2) = 1e-10
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = -1

Query: 289 EVSTWPYSFVSSPYFLAAKERGSASGRLLVQGK 191
           E + WPYSF  SP F  A ERGS +GRLLV+ +
Sbjct: 306 EAAKWPYSFPESPDFHKAGERGSVTGRLLVRDR 338


>gb|AAB60743.1| F21M12.30 gene product [Arabidopsis thaliana]
          Length = 728

 Score = 49.3 bits (116), Expect(2) = 2e-10
 Identities = 19/42 (45%), Positives = 28/42 (66%)
 Frame = -2

Query: 126 QITVNHRFVSGALIPAKSAYVGLSVARTEGGWEVESKGYQFW 1
           ++ +  RF++  LI A+ AYVGL+     G W++E KGYQFW
Sbjct: 410 RLLIRDRFINNDLISARGAYVGLAPPGDSGSWQIECKGYQFW 451



 Score = 40.8 bits (94), Expect(2) = 2e-10
 Identities = 17/35 (48%), Positives = 26/35 (74%)
 Frame = -1

Query: 295 LLEVSTWPYSFVSSPYFLAAKERGSASGRLLVQGK 191
           + EV  WPYSFV+S  +  ++ERG+A GRLL++ +
Sbjct: 382 MAEVERWPYSFVASDDYPKSEERGTARGRLLIRDR 416


>ref|XP_002301113.1| predicted protein [Populus trichocarpa] gi|222842839|gb|EEE80386.1|
           predicted protein [Populus trichocarpa]
          Length = 683

 Score = 50.8 bits (120), Expect(2) = 2e-10
 Identities = 22/42 (52%), Positives = 29/42 (69%)
 Frame = -2

Query: 126 QITVNHRFVSGALIPAKSAYVGLSVARTEGGWEVESKGYQFW 1
           ++ V  R+VS A I A+ AYVGL+     G W++ESKGYQFW
Sbjct: 385 RLLVLERYVSNATISAEGAYVGLAAPGEAGSWQLESKGYQFW 426



 Score = 39.3 bits (90), Expect(2) = 2e-10
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = -1

Query: 289 EVSTWPYSFVSSPYFLAAKERGSASGRLLV 200
           EV  WPY F++S  F  +K+RGS  GRLLV
Sbjct: 359 EVHKWPYDFIASEDFPPSKQRGSVGGRLLV 388