BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042629
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308717.1| f-box family protein [Populus trichocarpa] g...   107   8e-22
ref|XP_004166318.1| PREDICTED: F-box protein PP2-B11-like, parti...   105   5e-21
ref|XP_004134378.1| PREDICTED: putative F-box protein PP2-B12-li...   105   5e-21
ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
gb|AAZ81601.1| Tomf2 [Nicotiana tomentosiformis] gi|73698130|gb|...   104   6e-21

>ref|XP_002308717.1| f-box family protein [Populus trichocarpa]
           gi|222854693|gb|EEE92240.1| f-box family protein
           [Populus trichocarpa]
          Length = 292

 Score =  107 bits (268), Expect = 8e-22
 Identities = 70/165 (42%), Positives = 87/165 (52%), Gaps = 27/165 (16%)
 Frame = -3

Query: 449 SCRFAEVADLQNVWWREISGKIDTRMLSPKTTYGAYLVFKIKDNEFGGYNQWPPADVSVK 270
           S RF EVA+L  V W EI GKI+  MLSP T Y AYLVFK K+  +G    + P +V V 
Sbjct: 127 SSRFGEVAELIGVCWLEICGKINATMLSPATLYAAYLVFKPKEGAYG--LDYQPVEVGVG 184

Query: 269 FVEAGSGASDDQIAYLDP-------------------------TQRPVNAP--NGEVPSM 171
            V + +G  +    YLD                           Q PV A   NG+ P  
Sbjct: 185 LVGSENGKRN---VYLDSQRGRAHRYHLVRRRIGLHNRSRIVGMQEPVPASENNGQHPKE 241

Query: 170 RRDGWMEIKLGQLYNDHGEDGEVEMSLMEVKAGVVKEGLVVEGIE 36
           R DGW+EI+LG+ +   GEDGE+EM + EVK+G  K GL VEGIE
Sbjct: 242 RGDGWLEIELGEFFCKEGEDGELEMRVQEVKSGDWKGGLTVEGIE 286


>ref|XP_004166318.1| PREDICTED: F-box protein PP2-B11-like, partial [Cucumis sativus]
          Length = 136

 Score =  105 bits (261), Expect = 5e-21
 Identities = 60/137 (43%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
 Frame = -3

Query: 440 FAEVADLQNVWWREISGKIDTRMLSPKTTYGAYLVFKIKDNEF--GGYNQWPPADVSVKF 267
           F EVA+L+ VWW EI GKI+ R LSPKT Y AY VFK K+ +F   G+    P  + V F
Sbjct: 1   FPEVAELRVVWWLEIKGKIEGRNLSPKTKYAAYFVFKFKEGDFQHDGFGT-KPVSLEVYF 59

Query: 266 VEAGSGASDDQIAYLDPTQRPVNAPNGEVPSMRRDGWMEIKLGQLYNDHGEDGEVEMSLM 87
                G    ++  LDP   P  +P   V   R DGWME+++G+ +N+ G+DG V   L 
Sbjct: 60  EGEEVGEDGTKMVLLDP---PEGSP--VVCKERSDGWMEVEMGEFFNELGDDGMVIFHLK 114

Query: 86  EVKAGVVKEGLVVEGIE 36
           ++  G++K GL+VEGIE
Sbjct: 115 QID-GIIKGGLIVEGIE 130


>ref|XP_004134378.1| PREDICTED: putative F-box protein PP2-B12-like [Cucumis sativus]
          Length = 267

 Score =  105 bits (261), Expect = 5e-21
 Identities = 60/138 (43%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
 Frame = -3

Query: 443 RFAEVADLQNVWWREISGKIDTRMLSPKTTYGAYLVFKIKDNEF--GGYNQWPPADVSVK 270
           RF+EVA+LQ VWW EI GKI+ R LSPKT Y AY VFK K+ +F   G+    P  + V 
Sbjct: 131 RFSEVAELQYVWWLEIKGKIEGRNLSPKTKYAAYFVFKFKEGDFQHDGFGT-KPVSLEVY 189

Query: 269 FVEAGSGASDDQIAYLDPTQRPVNAPNGEVPSMRRDGWMEIKLGQLYNDHGEDGEVEMSL 90
           F     G    ++  LDP   P  +P   V   R DGWME+++G+ +N+ G+DG +   L
Sbjct: 190 FEGEEVGEDGTKMVLLDP---PEGSP--VVCKERSDGWMEVEMGEFFNELGDDGIIIFHL 244

Query: 89  MEVKAGVVKEGLVVEGIE 36
           M++   + K GL+VEG+E
Sbjct: 245 MQIDR-LRKGGLIVEGVE 261


>ref|XP_002324348.1| predicted protein [Populus trichocarpa] gi|222865782|gb|EEF02913.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score =  105 bits (261), Expect = 5e-21
 Identities = 66/165 (40%), Positives = 83/165 (50%), Gaps = 27/165 (16%)
 Frame = -3

Query: 449 SCRFAEVADLQNVWWREISGKIDTRMLSPKTTYGAYLVFKIKDNEFGGYNQWPPADVSVK 270
           S RF EVA+L +V W EI GKI+  MLSP T Y AYLVF+     +G    + P +V V 
Sbjct: 138 SSRFGEVAELISVCWLEIRGKINATMLSPATLYTAYLVFRPTRGLYG--LDYQPVEVGVG 195

Query: 269 FVEAGSGASDDQIAYLD---------------------------PTQRPVNAPNGEVPSM 171
            V +  G  +    YLD                           P   P    NG+ P  
Sbjct: 196 LVGSECGMRN---VYLDSERGRRQQYHFVSRRIGLFNRCRIVGMPASEPARENNGQYPKK 252

Query: 170 RRDGWMEIKLGQLYNDHGEDGEVEMSLMEVKAGVVKEGLVVEGIE 36
           R DGW+EI+LG+ +   GED E+EMS+ EVK G  K GL+VEGIE
Sbjct: 253 REDGWLEIELGEFFCKEGEDRELEMSVQEVKGGDWKGGLIVEGIE 297


>gb|AAZ81601.1| Tomf2 [Nicotiana tomentosiformis] gi|73698130|gb|AAZ81602.1| Tomf3
           [Nicotiana tomentosiformis]
          Length = 165

 Score =  104 bits (260), Expect = 6e-21
 Identities = 56/134 (41%), Positives = 80/134 (59%), Gaps = 1/134 (0%)
 Frame = -3

Query: 434 EVADLQNVWWREISGKIDTRMLSPKTTYGAYLVFKIKDNEFGGYNQWPPADVSVKFV-EA 258
           EVA+L+ V W +I GKI+T+ L  KT+Y  YLVFK+ DN      +   A  S++FV E 
Sbjct: 32  EVAELRRVAWLDIYGKIETKKLIRKTSYAVYLVFKLTDNP----RELERATASLRFVNEV 87

Query: 257 GSGASDDQIAYLDPTQRPVNAPNGEVPSMRRDGWMEIKLGQLYNDHGEDGEVEMSLMEVK 78
             GA  +        ++ +    G  P +R DGW+EIKLG+ +N+ GEDGEVEM LME+ 
Sbjct: 88  AEGAGIEGTTVFISKKKELPGELGRFPHLRSDGWLEIKLGEFFNNLGEDGEVEMRLMEIN 147

Query: 77  AGVVKEGLVVEGIE 36
               K G++V+G +
Sbjct: 148 DKTWKSGIIVKGFD 161