BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042618
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26569.3| unnamed protein product [Vitis vinifera]               58   7e-07
emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]    58   7e-07
ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06
ref|XP_004164250.1| PREDICTED: putative pentatricopeptide repeat...    55   8e-06
ref|XP_004146932.1| PREDICTED: putative pentatricopeptide repeat...    55   8e-06

>emb|CBI26569.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = +2

Query: 2   KIYKEMESVGCTPDRKAREMLQSASMVLEQGHGRQYT*CL 121
           +IY+EMES GCTPDRKAREMLQ+A +VL+Q H + Y  C+
Sbjct: 350 EIYEEMESAGCTPDRKAREMLQTALLVLQQRHCKYYFGCI 389


>emb|CAN76113.1| hypothetical protein VITISV_005528 [Vitis vinifera]
          Length = 466

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = +2

Query: 2   KIYKEMESVGCTPDRKAREMLQSASMVLEQGHGRQYT*CL 121
           +IY+EMES GCTPDRKAREMLQ+A +VL+Q H + Y  C+
Sbjct: 424 EIYEEMESAGCTPDRKAREMLQTALLVLQQRHCKYYFGCI 463


>ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/36 (69%), Positives = 31/36 (86%)
 Frame = +2

Query: 2   KIYKEMESVGCTPDRKAREMLQSASMVLEQGHGRQY 109
           +IY+EMES GCTPDRKAREMLQ+A +VL+Q H + Y
Sbjct: 429 EIYEEMESAGCTPDRKAREMLQTALLVLQQRHCKYY 464


>ref|XP_004164250.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g36300-like [Cucumis sativus]
          Length = 433

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = +2

Query: 2   KIYKEMESVGCTPDRKAREMLQSASMVLEQGH 97
           +IYKEMES GCTPDRKAREML+S + +LEQ H
Sbjct: 353 EIYKEMESAGCTPDRKAREMLKSVTAILEQRH 384


>ref|XP_004146932.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g36300-like [Cucumis sativus]
          Length = 455

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/32 (75%), Positives = 28/32 (87%)
 Frame = +2

Query: 2   KIYKEMESVGCTPDRKAREMLQSASMVLEQGH 97
           +IYKEMES GCTPDRKAREML+S + +LEQ H
Sbjct: 353 EIYKEMESAGCTPDRKAREMLKSVTAILEQRH 384