BLASTX nr result
ID: Coptis25_contig00042608
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00042608 (265 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635187.1| PREDICTED: transcription factor DYSFUNCTIONA... 69 3e-10 ref|XP_003635181.1| PREDICTED: transcription factor DYSFUNCTIONA... 69 3e-10 emb|CAN76852.1| hypothetical protein VITISV_006000 [Vitis vinifera] 69 3e-10 ref|XP_002518587.1| DNA binding protein, putative [Ricinus commu... 67 1e-09 ref|XP_002305631.1| predicted protein [Populus trichocarpa] gi|2... 63 2e-08 >ref|XP_003635187.1| PREDICTED: transcription factor DYSFUNCTIONAL TAPETUM 1-like [Vitis vinifera] Length = 204 Score = 69.3 bits (168), Expect = 3e-10 Identities = 36/61 (59%), Positives = 44/61 (72%) Frame = -1 Query: 190 KNLEAERRRRHKLNERLITLRALVPIITNMNKXXXXXXXXXXXTGLQNHVKGLSERLIEM 11 KNL+AERRRR KL++RL+ LRALVPIITNMNK LQ +VK LS++L+EM Sbjct: 36 KNLQAERRRRQKLSDRLLALRALVPIITNMNKATIIEDAITYIKELQKNVKDLSDQLLEM 95 Query: 10 E 8 E Sbjct: 96 E 96 >ref|XP_003635181.1| PREDICTED: transcription factor DYSFUNCTIONAL TAPETUM 1-like [Vitis vinifera] Length = 204 Score = 69.3 bits (168), Expect = 3e-10 Identities = 36/61 (59%), Positives = 44/61 (72%) Frame = -1 Query: 190 KNLEAERRRRHKLNERLITLRALVPIITNMNKXXXXXXXXXXXTGLQNHVKGLSERLIEM 11 KNL+AERRRR KL++RL+ LRALVPIITNMNK LQ +VK LS++L+EM Sbjct: 36 KNLQAERRRRQKLSDRLLALRALVPIITNMNKATIIEDAITYIKELQKNVKDLSDQLLEM 95 Query: 10 E 8 E Sbjct: 96 E 96 >emb|CAN76852.1| hypothetical protein VITISV_006000 [Vitis vinifera] Length = 204 Score = 69.3 bits (168), Expect = 3e-10 Identities = 36/61 (59%), Positives = 44/61 (72%) Frame = -1 Query: 190 KNLEAERRRRHKLNERLITLRALVPIITNMNKXXXXXXXXXXXTGLQNHVKGLSERLIEM 11 KNL+AERRRR KL++RL+ LRALVPIITNMNK LQ +VK LS++L+EM Sbjct: 36 KNLQAERRRRQKLSDRLLALRALVPIITNMNKATIIEDAITYIKELQKNVKDLSDQLLEM 95 Query: 10 E 8 E Sbjct: 96 E 96 >ref|XP_002518587.1| DNA binding protein, putative [Ricinus communis] gi|223542432|gb|EEF43974.1| DNA binding protein, putative [Ricinus communis] Length = 207 Score = 67.4 bits (163), Expect = 1e-09 Identities = 36/61 (59%), Positives = 42/61 (68%) Frame = -1 Query: 190 KNLEAERRRRHKLNERLITLRALVPIITNMNKXXXXXXXXXXXTGLQNHVKGLSERLIEM 11 KNL AERRRR KL+ERL+ LRA VPIITNMNK LQ HVK LS++L+EM Sbjct: 39 KNLGAERRRRKKLSERLLALRASVPIITNMNKATIIEDAITYIQELQKHVKHLSDQLLEM 98 Query: 10 E 8 + Sbjct: 99 D 99 >ref|XP_002305631.1| predicted protein [Populus trichocarpa] gi|222848595|gb|EEE86142.1| predicted protein [Populus trichocarpa] Length = 209 Score = 63.2 bits (152), Expect = 2e-08 Identities = 34/61 (55%), Positives = 41/61 (67%) Frame = -1 Query: 190 KNLEAERRRRHKLNERLITLRALVPIITNMNKXXXXXXXXXXXTGLQNHVKGLSERLIEM 11 KNL AERRRR KL+ RL+TLRALVPIITNMNK L+ +V+ L++ L EM Sbjct: 40 KNLHAERRRREKLSNRLLTLRALVPIITNMNKGTIIEDAITYIQELKKNVEALTDMLQEM 99 Query: 10 E 8 E Sbjct: 100 E 100