BLASTX nr result

ID: Coptis25_contig00042608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042608
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635187.1| PREDICTED: transcription factor DYSFUNCTIONA...    69   3e-10
ref|XP_003635181.1| PREDICTED: transcription factor DYSFUNCTIONA...    69   3e-10
emb|CAN76852.1| hypothetical protein VITISV_006000 [Vitis vinifera]    69   3e-10
ref|XP_002518587.1| DNA binding protein, putative [Ricinus commu...    67   1e-09
ref|XP_002305631.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>ref|XP_003635187.1| PREDICTED: transcription factor DYSFUNCTIONAL TAPETUM 1-like [Vitis
           vinifera]
          Length = 204

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/61 (59%), Positives = 44/61 (72%)
 Frame = -1

Query: 190 KNLEAERRRRHKLNERLITLRALVPIITNMNKXXXXXXXXXXXTGLQNHVKGLSERLIEM 11
           KNL+AERRRR KL++RL+ LRALVPIITNMNK             LQ +VK LS++L+EM
Sbjct: 36  KNLQAERRRRQKLSDRLLALRALVPIITNMNKATIIEDAITYIKELQKNVKDLSDQLLEM 95

Query: 10  E 8
           E
Sbjct: 96  E 96


>ref|XP_003635181.1| PREDICTED: transcription factor DYSFUNCTIONAL TAPETUM 1-like [Vitis
           vinifera]
          Length = 204

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/61 (59%), Positives = 44/61 (72%)
 Frame = -1

Query: 190 KNLEAERRRRHKLNERLITLRALVPIITNMNKXXXXXXXXXXXTGLQNHVKGLSERLIEM 11
           KNL+AERRRR KL++RL+ LRALVPIITNMNK             LQ +VK LS++L+EM
Sbjct: 36  KNLQAERRRRQKLSDRLLALRALVPIITNMNKATIIEDAITYIKELQKNVKDLSDQLLEM 95

Query: 10  E 8
           E
Sbjct: 96  E 96


>emb|CAN76852.1| hypothetical protein VITISV_006000 [Vitis vinifera]
          Length = 204

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/61 (59%), Positives = 44/61 (72%)
 Frame = -1

Query: 190 KNLEAERRRRHKLNERLITLRALVPIITNMNKXXXXXXXXXXXTGLQNHVKGLSERLIEM 11
           KNL+AERRRR KL++RL+ LRALVPIITNMNK             LQ +VK LS++L+EM
Sbjct: 36  KNLQAERRRRQKLSDRLLALRALVPIITNMNKATIIEDAITYIKELQKNVKDLSDQLLEM 95

Query: 10  E 8
           E
Sbjct: 96  E 96


>ref|XP_002518587.1| DNA binding protein, putative [Ricinus communis]
           gi|223542432|gb|EEF43974.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 207

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 36/61 (59%), Positives = 42/61 (68%)
 Frame = -1

Query: 190 KNLEAERRRRHKLNERLITLRALVPIITNMNKXXXXXXXXXXXTGLQNHVKGLSERLIEM 11
           KNL AERRRR KL+ERL+ LRA VPIITNMNK             LQ HVK LS++L+EM
Sbjct: 39  KNLGAERRRRKKLSERLLALRASVPIITNMNKATIIEDAITYIQELQKHVKHLSDQLLEM 98

Query: 10  E 8
           +
Sbjct: 99  D 99


>ref|XP_002305631.1| predicted protein [Populus trichocarpa] gi|222848595|gb|EEE86142.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/61 (55%), Positives = 41/61 (67%)
 Frame = -1

Query: 190 KNLEAERRRRHKLNERLITLRALVPIITNMNKXXXXXXXXXXXTGLQNHVKGLSERLIEM 11
           KNL AERRRR KL+ RL+TLRALVPIITNMNK             L+ +V+ L++ L EM
Sbjct: 40  KNLHAERRRREKLSNRLLTLRALVPIITNMNKGTIIEDAITYIQELKKNVEALTDMLQEM 99

Query: 10  E 8
           E
Sbjct: 100 E 100


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