BLASTX nr result

ID: Coptis25_contig00042586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042586
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83852.1| hypothetical protein VITISV_037564 [Vitis vinifera]    48   2e-10
ref|XP_002285448.2| PREDICTED: putative clathrin assembly protei...    48   2e-10
emb|CBI28256.3| unnamed protein product [Vitis vinifera]               48   2e-10
ref|XP_002271781.2| PREDICTED: putative clathrin assembly protei...    52   4e-10
emb|CBI36596.3| unnamed protein product [Vitis vinifera]               52   4e-10

>emb|CAN83852.1| hypothetical protein VITISV_037564 [Vitis vinifera]
          Length = 588

 Score = 48.1 bits (113), Expect(2) = 2e-10
 Identities = 24/32 (75%), Positives = 27/32 (84%)
 Frame = +3

Query: 84  GSTQLNLRKALGALKDSTKVGLAKGNSEYKFL 179
           G TQ +LRKALGA+KDST VGLAK NS+YK L
Sbjct: 4   GGTQKSLRKALGAIKDSTTVGLAKVNSDYKEL 35



 Score = 41.6 bits (96), Expect(2) = 2e-10
 Identities = 20/26 (76%), Positives = 22/26 (84%)
 Frame = +2

Query: 191 SFFEELDIAIVKATNHVEHIEKEKHI 268
           S ++ELDIAIVKATNHVE   KEKHI
Sbjct: 30  SDYKELDIAIVKATNHVERPAKEKHI 55


>ref|XP_002285448.2| PREDICTED: putative clathrin assembly protein At5g35200 isoform 1
           [Vitis vinifera] gi|359484230|ref|XP_003633084.1|
           PREDICTED: putative clathrin assembly protein At5g35200
           isoform 2 [Vitis vinifera]
          Length = 555

 Score = 48.1 bits (113), Expect(2) = 2e-10
 Identities = 24/32 (75%), Positives = 27/32 (84%)
 Frame = +3

Query: 84  GSTQLNLRKALGALKDSTKVGLAKGNSEYKFL 179
           G TQ +LRKALGA+KDST VGLAK NS+YK L
Sbjct: 4   GGTQKSLRKALGAIKDSTTVGLAKVNSDYKEL 35



 Score = 41.6 bits (96), Expect(2) = 2e-10
 Identities = 20/26 (76%), Positives = 22/26 (84%)
 Frame = +2

Query: 191 SFFEELDIAIVKATNHVEHIEKEKHI 268
           S ++ELDIAIVKATNHVE   KEKHI
Sbjct: 30  SDYKELDIAIVKATNHVERPAKEKHI 55


>emb|CBI28256.3| unnamed protein product [Vitis vinifera]
          Length = 505

 Score = 48.1 bits (113), Expect(2) = 2e-10
 Identities = 24/32 (75%), Positives = 27/32 (84%)
 Frame = +3

Query: 84  GSTQLNLRKALGALKDSTKVGLAKGNSEYKFL 179
           G TQ +LRKALGA+KDST VGLAK NS+YK L
Sbjct: 4   GGTQKSLRKALGAIKDSTTVGLAKVNSDYKEL 35



 Score = 41.6 bits (96), Expect(2) = 2e-10
 Identities = 20/26 (76%), Positives = 22/26 (84%)
 Frame = +2

Query: 191 SFFEELDIAIVKATNHVEHIEKEKHI 268
           S ++ELDIAIVKATNHVE   KEKHI
Sbjct: 30  SDYKELDIAIVKATNHVERPAKEKHI 55


>ref|XP_002271781.2| PREDICTED: putative clathrin assembly protein At5g35200-like [Vitis
           vinifera]
          Length = 542

 Score = 51.6 bits (122), Expect(2) = 4e-10
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +3

Query: 72  MAGIGSTQLNLRKALGALKDSTKVGLAKGNSEYKFL 179
           MA  GSTQ +LR+A+GALKDSTKVGLAK NS YK L
Sbjct: 1   MAAGGSTQQSLRRAIGALKDSTKVGLAKVNSGYKAL 36



 Score = 37.4 bits (85), Expect(2) = 4e-10
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = +2

Query: 191 SFFEELDIAIVKATNHVEHIEKEKHI 268
           S ++ LDIAIVKATNH E + KEKHI
Sbjct: 31  SGYKALDIAIVKATNHDEVLAKEKHI 56


>emb|CBI36596.3| unnamed protein product [Vitis vinifera]
          Length = 510

 Score = 51.6 bits (122), Expect(2) = 4e-10
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +3

Query: 72  MAGIGSTQLNLRKALGALKDSTKVGLAKGNSEYKFL 179
           MA  GSTQ +LR+A+GALKDSTKVGLAK NS YK L
Sbjct: 1   MAAGGSTQQSLRRAIGALKDSTKVGLAKVNSGYKAL 36



 Score = 37.4 bits (85), Expect(2) = 4e-10
 Identities = 18/26 (69%), Positives = 21/26 (80%)
 Frame = +2

Query: 191 SFFEELDIAIVKATNHVEHIEKEKHI 268
           S ++ LDIAIVKATNH E + KEKHI
Sbjct: 31  SGYKALDIAIVKATNHDEVLAKEKHI 56


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