BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042572
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containi...   152   4e-35
ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_002511816.1| pentatricopeptide repeat-containing protein,...   136   2e-30
ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|2...   134   8e-30
emb|CAN79718.1| hypothetical protein VITISV_012741 [Vitis vinifera]   134   8e-30

>ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           [Vitis vinifera] gi|297736023|emb|CBI24061.3| unnamed
           protein product [Vitis vinifera]
          Length = 423

 Score =  152 bits (383), Expect = 4e-35
 Identities = 73/93 (78%), Positives = 83/93 (89%)
 Frame = -3

Query: 280 YSSAISCFGKSGQLEMMESTLMDMVSSGLPVDSATGNAFLRYYSVFGSLTEMEVAYGRFK 101
           YS AISCFGK GQLEMME+ L +MVS G PVDSATGNAF+RYYS+FGSLTEME AY R K
Sbjct: 163 YSLAISCFGKGGQLEMMENALKEMVSRGFPVDSATGNAFIRYYSIFGSLTEMEAAYDRLK 222

Query: 100 KSRILIEEEGIRAMASAYIKKRKFYKLGEFLRD 2
           KSRILIEEEGIRAM+ AYIK++K+Y+LG+FLRD
Sbjct: 223 KSRILIEEEGIRAMSFAYIKEKKYYRLGQFLRD 255


>ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis sativus]
           gi|449507537|ref|XP_004163059.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis sativus]
          Length = 388

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/93 (74%), Positives = 80/93 (86%)
 Frame = -3

Query: 280 YSSAISCFGKSGQLEMMESTLMDMVSSGLPVDSATGNAFLRYYSVFGSLTEMEVAYGRFK 101
           YS AISCFGK  QLE+MESTL +MVSSG  V+SATGN+F+ YYS+FGSL EME AYGR K
Sbjct: 128 YSLAISCFGKHKQLELMESTLREMVSSGFTVNSATGNSFIIYYSMFGSLVEMETAYGRLK 187

Query: 100 KSRILIEEEGIRAMASAYIKKRKFYKLGEFLRD 2
           +SR LIE++GI AMA AYI+KRKFY+LGEFLRD
Sbjct: 188 RSRFLIEKKGIMAMAFAYIRKRKFYRLGEFLRD 220


>ref|XP_002511816.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548996|gb|EEF50485.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 427

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/93 (68%), Positives = 78/93 (83%)
 Frame = -3

Query: 280 YSSAISCFGKSGQLEMMESTLMDMVSSGLPVDSATGNAFLRYYSVFGSLTEMEVAYGRFK 101
           YS AISCFGK GQL++ME+ L DMV  G PVD ATGNAF+RYYS+ GSLT+ME AY R K
Sbjct: 167 YSLAISCFGKGGQLQLMENALKDMVLRGFPVDYATGNAFIRYYSIHGSLTDMESAYSRLK 226

Query: 100 KSRILIEEEGIRAMASAYIKKRKFYKLGEFLRD 2
           +SR L++ EGIRA++ AY+K+RKFY+LGEFLRD
Sbjct: 227 RSRHLVDREGIRAVSLAYVKERKFYRLGEFLRD 259


>ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|222873650|gb|EEF10781.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  134 bits (337), Expect = 8e-30
 Identities = 68/93 (73%), Positives = 75/93 (80%)
 Frame = -3

Query: 280 YSSAISCFGKSGQLEMMESTLMDMVSSGLPVDSATGNAFLRYYSVFGSLTEMEVAYGRFK 101
           YS AISCFGK GQLE+ME TL  MVS G  VDSATGNAF+ YYS+ GSL EME AY R K
Sbjct: 168 YSLAISCFGKGGQLELMEDTLKKMVSKGFWVDSATGNAFVVYYSLHGSLAEMEAAYDRLK 227

Query: 100 KSRILIEEEGIRAMASAYIKKRKFYKLGEFLRD 2
           +SR+LIE EGIRAM+ AYIK+RKFY L EFLRD
Sbjct: 228 RSRLLIEREGIRAMSFAYIKERKFYGLSEFLRD 260


>emb|CAN79718.1| hypothetical protein VITISV_012741 [Vitis vinifera]
          Length = 446

 Score =  134 bits (337), Expect = 8e-30
 Identities = 64/84 (76%), Positives = 75/84 (89%)
 Frame = -3

Query: 253 KSGQLEMMESTLMDMVSSGLPVDSATGNAFLRYYSVFGSLTEMEVAYGRFKKSRILIEEE 74
           + GQLEMME+ L +MVS G PVDSATGNAF+RYYS+FGSLTEME AY R KKSRILIEEE
Sbjct: 195 QGGQLEMMENALKEMVSRGFPVDSATGNAFIRYYSIFGSLTEMEAAYDRLKKSRILIEEE 254

Query: 73  GIRAMASAYIKKRKFYKLGEFLRD 2
           GIRAM+ AYIK++K+Y+LG+FLRD
Sbjct: 255 GIRAMSFAYIKEKKYYRLGQFLRD 278