BLASTX nr result

ID: Coptis25_contig00042562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042562
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officina...   122   3e-26
ref|XP_003545713.1| PREDICTED: uncharacterized protein LOC100775...   116   2e-24
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   116   2e-24
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]   116   2e-24
ref|XP_003551221.1| PREDICTED: uncharacterized protein LOC100778...   114   6e-24

>gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officinalis]
          Length = 358

 Score =  122 bits (306), Expect = 3e-26
 Identities = 57/101 (56%), Positives = 74/101 (73%)
 Frame = -1

Query: 319 VFYLPDWSKVFEVTCDASKIGIGATLSQGGHPIEYFSEKLKQLQLNYSTYDPELHALVRA 140
           V  LPD+SKVFEV CDAS IGIG  LSQ  HPI YFS KL   +LNYSTYD E +A+V++
Sbjct: 234 VMRLPDFSKVFEVACDASGIGIGGVLSQEKHPIAYFSAKLSGAKLNYSTYDKEFYAVVQS 293

Query: 139 LIHWRHYLIHREFIINSDHDAMRFLGTNRRFQIDRLSFLTF 17
           L HWRHYL+ +EF+I SDH+A+R+L + ++    R  ++ F
Sbjct: 294 LRHWRHYLLPQEFVIYSDHEALRYLNSQKKLNARRARWVEF 334


>ref|XP_003545713.1| PREDICTED: uncharacterized protein LOC100775347, partial [Glycine
            max]
          Length = 1071

 Score =  116 bits (290), Expect = 2e-24
 Identities = 50/85 (58%), Positives = 66/85 (77%)
 Frame = -1

Query: 319  VFYLPDWSKVFEVTCDASKIGIGATLSQGGHPIEYFSEKLKQLQLNYSTYDPELHALVRA 140
            V  LPD+SK FE+ CDAS++G+GA L QGGHPI YFS+KL    LNY TYD EL+AL+RA
Sbjct: 964  VLALPDFSKTFELECDASRVGVGAVLLQGGHPIAYFSDKLHSATLNYPTYDKELYALIRA 1023

Query: 139  LIHWRHYLIHREFIINSDHDAMRFL 65
            L  W HYL+ +EF+I SDH +++++
Sbjct: 1024 LQTWEHYLVSKEFVIYSDHQSLKYI 1048


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  116 bits (290), Expect = 2e-24
 Identities = 50/101 (49%), Positives = 73/101 (72%)
 Frame = -1

Query: 319  VFYLPDWSKVFEVTCDASKIGIGATLSQGGHPIEYFSEKLKQLQLNYSTYDPELHALVRA 140
            +  LPD+ KVFEV CDAS +GIGA LSQ GHP+ +FSEKL   +  YSTYD E +A+V+A
Sbjct: 908  ILRLPDFEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEFYAVVQA 967

Query: 139  LIHWRHYLIHREFIINSDHDAMRFLGTNRRFQIDRLSFLTF 17
            + HW+HYL ++EF++ SDH+A+R+L + ++       + +F
Sbjct: 968  IRHWQHYLSYKEFVLYSDHEALRYLNSQKKLNSRHAKWSSF 1008


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score =  116 bits (290), Expect = 2e-24
 Identities = 50/101 (49%), Positives = 73/101 (72%)
 Frame = -1

Query: 319  VFYLPDWSKVFEVTCDASKIGIGATLSQGGHPIEYFSEKLKQLQLNYSTYDPELHALVRA 140
            +  LPD+ KVFEV CDAS +GIGA LSQ GHP+ +FSEKL   +  YSTYD E +A+V+A
Sbjct: 833  ILRLPDFEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKLNGAKKKYSTYDLEFYAVVQA 892

Query: 139  LIHWRHYLIHREFIINSDHDAMRFLGTNRRFQIDRLSFLTF 17
            + HW+HYL ++EF++ SDH+A+R+L + ++       + +F
Sbjct: 893  IRHWQHYLSYKEFVLYSDHEALRYLNSQKKLNSRHAKWSSF 933


>ref|XP_003551221.1| PREDICTED: uncharacterized protein LOC100778797, partial [Glycine
            max]
          Length = 963

 Score =  114 bits (286), Expect = 6e-24
 Identities = 49/85 (57%), Positives = 67/85 (78%)
 Frame = -1

Query: 319  VFYLPDWSKVFEVTCDASKIGIGATLSQGGHPIEYFSEKLKQLQLNYSTYDPELHALVRA 140
            +  L D+SK FE+ CDAS++G+GA L QGGHPI YFSEKL    LNY+TYD EL+AL+RA
Sbjct: 856  ILALLDFSKTFELECDASRVGVGAVLLQGGHPIAYFSEKLHSSTLNYATYDKELYALIRA 915

Query: 139  LIHWRHYLIHREFIINSDHDAMRFL 65
            L  W HYL+ +EF+I+SDH +++++
Sbjct: 916  LQTWEHYLVSKEFVIHSDHQSLKYI 940


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