BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042550
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]   142   4e-32
emb|CBI30318.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containi...   140   1e-31
ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containi...   139   3e-31
ref|XP_002323422.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26

>emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  142 bits (357), Expect = 4e-32
 Identities = 62/89 (69%), Positives = 78/89 (87%)
 Frame = +2

Query: 2    HSNIGLAERAAESLLQMRPNNSGHFVLLSNIYAKAGRWGDVAKMREIMTHRRLKKIPGWT 181
            H ++ LAE+AA SLL+++P N GH++LLSNIYA AGRW DVAK+R++M+ RRLKKIPGWT
Sbjct: 1119 HKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQRRLKKIPGWT 1178

Query: 182  WIEVDDKIHQFSVGDNSHPHSKKIYEMLR 268
            WIEVD+K HQFSVGD +HP SK+IYEML+
Sbjct: 1179 WIEVDNKSHQFSVGDTTHPRSKEIYEMLK 1207



 Score =  136 bits (343), Expect = 2e-30
 Identities = 61/89 (68%), Positives = 76/89 (85%)
 Frame = +2

Query: 2   HSNIGLAERAAESLLQMRPNNSGHFVLLSNIYAKAGRWGDVAKMREIMTHRRLKKIPGWT 181
           H ++ LAE+AA SLL+++  N GH+VLLSNIYA AGRW DVAK+R++M+ RRLKK PGWT
Sbjct: 443 HKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRLKKTPGWT 502

Query: 182 WIEVDDKIHQFSVGDNSHPHSKKIYEMLR 268
           WIEVD+K HQFSVGD +HP SK+IYEML+
Sbjct: 503 WIEVDNKSHQFSVGDTTHPRSKEIYEMLK 531


>emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  140 bits (353), Expect = 1e-31
 Identities = 62/89 (69%), Positives = 77/89 (86%)
 Frame = +2

Query: 2   HSNIGLAERAAESLLQMRPNNSGHFVLLSNIYAKAGRWGDVAKMREIMTHRRLKKIPGWT 181
           H ++ LAE+AA SLL+++P N GH++LLSNIYA AGRW DVAK R++M+ RRLKKIPGWT
Sbjct: 671 HKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWT 730

Query: 182 WIEVDDKIHQFSVGDNSHPHSKKIYEMLR 268
           WIEVD+K HQFSVGD +HP SK+IYEML+
Sbjct: 731 WIEVDNKSHQFSVGDTTHPRSKEIYEMLK 759


>ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  140 bits (353), Expect = 1e-31
 Identities = 62/89 (69%), Positives = 77/89 (86%)
 Frame = +2

Query: 2   HSNIGLAERAAESLLQMRPNNSGHFVLLSNIYAKAGRWGDVAKMREIMTHRRLKKIPGWT 181
           H ++ LAE+AA SLL+++P N GH++LLSNIYA AGRW DVAK R++M+ RRLKKIPGWT
Sbjct: 515 HKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWT 574

Query: 182 WIEVDDKIHQFSVGDNSHPHSKKIYEMLR 268
           WIEVD+K HQFSVGD +HP SK+IYEML+
Sbjct: 575 WIEVDNKSHQFSVGDTTHPRSKEIYEMLK 603


>ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/88 (71%), Positives = 76/88 (86%)
 Frame = +2

Query: 2   HSNIGLAERAAESLLQMRPNNSGHFVLLSNIYAKAGRWGDVAKMREIMTHRRLKKIPGWT 181
           HS + LAE+AA SLL+++P N GH+VLLSNIYAKAG+W  VAK R++MT R+LKKIPGWT
Sbjct: 383 HSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKKIPGWT 442

Query: 182 WIEVDDKIHQFSVGDNSHPHSKKIYEML 265
           WIEVD+K +QFSVGD SHP SK+IYEML
Sbjct: 443 WIEVDNKTYQFSVGDRSHPQSKEIYEML 470


>ref|XP_002323422.1| predicted protein [Populus trichocarpa] gi|222868052|gb|EEF05183.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  120 bits (302), Expect = 9e-26
 Identities = 55/89 (61%), Positives = 70/89 (78%)
 Frame = +2

Query: 2   HSNIGLAERAAESLLQMRPNNSGHFVLLSNIYAKAGRWGDVAKMREIMTHRRLKKIPGWT 181
           H  + LAE+AA+ LL ++  N GH++LLSNIYA AGRW DVAK+R +M  RRLKKIPG+T
Sbjct: 384 HRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRRLKKIPGYT 443

Query: 182 WIEVDDKIHQFSVGDNSHPHSKKIYEMLR 268
           WIEVD+ I++F  GDNSH  S +IYEML+
Sbjct: 444 WIEVDNIIYRFGAGDNSHLRSNEIYEMLK 472