BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042539
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD34344.1| putative pentatricopeptide (PPR) repeat-containi...   188   3e-46
gb|EEC84744.1| hypothetical protein OsI_31741 [Oryza sativa Indi...   188   3e-46
ref|XP_003578281.1| PREDICTED: pentatricopeptide repeat-containi...   187   8e-46
ref|XP_002460391.1| hypothetical protein SORBIDRAFT_02g027420 [S...   184   6e-45
dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]    181   7e-44

>dbj|BAD34344.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 607

 Score =  188 bits (478), Expect = 3e-46
 Identities = 91/136 (66%), Positives = 110/136 (80%)
 Frame = +2

Query: 5   KAGKELIDLAPDDHASYVLLSNIYAMANNWSGVHEVRTAMWDRGIKKPPGCSSIELDGVV 184
           KAG  LI+ AP+DHA YVLLSNIYA+  NW+GVH+VR  M DRG++K PG SSIE+DGV+
Sbjct: 371 KAGHMLIEAAPNDHAGYVLLSNIYALDGNWTGVHKVRKLMLDRGVQKVPGSSSIEIDGVI 430

Query: 185 HEFVVGDAAHSQKKDIYIMLDEMAKKLKVAGYKPKTQEVLLDIDEEEVKQSSLGHHSEKL 364
           HEF+ GD +HS K+DIY ML EM ++LKVAGY P T  VLLDID+E+VK+SSL  HSEKL
Sbjct: 431 HEFISGDKSHSSKEDIYEMLSEMCQQLKVAGYVPDTSHVLLDIDDEDVKESSLALHSEKL 490

Query: 365 AVAFGFISTSPRTTIR 412
           A+AFG IST+P T IR
Sbjct: 491 AIAFGLISTAPGTPIR 506


>gb|EEC84744.1| hypothetical protein OsI_31741 [Oryza sativa Indica Group]
          Length = 563

 Score =  188 bits (478), Expect = 3e-46
 Identities = 91/136 (66%), Positives = 110/136 (80%)
 Frame = +2

Query: 5   KAGKELIDLAPDDHASYVLLSNIYAMANNWSGVHEVRTAMWDRGIKKPPGCSSIELDGVV 184
           KAG  LI+ AP+DHA YVLLSNIYA+  NW+GVH+VR  M DRG++K PG SSIE+DGV+
Sbjct: 380 KAGHMLIEAAPNDHAGYVLLSNIYALDGNWTGVHKVRKLMLDRGVQKVPGSSSIEIDGVI 439

Query: 185 HEFVVGDAAHSQKKDIYIMLDEMAKKLKVAGYKPKTQEVLLDIDEEEVKQSSLGHHSEKL 364
           HEF+ GD +HS K+DIY ML EM ++LKVAGY P T  VLLDID+E+VK+SSL  HSEKL
Sbjct: 440 HEFISGDKSHSSKEDIYEMLSEMCQQLKVAGYVPDTSHVLLDIDDEDVKESSLALHSEKL 499

Query: 365 AVAFGFISTSPRTTIR 412
           A+AFG IST+P T IR
Sbjct: 500 AIAFGLISTAPGTPIR 515


>ref|XP_003578281.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Brachypodium distachyon]
          Length = 547

 Score =  187 bits (475), Expect = 8e-46
 Identities = 87/137 (63%), Positives = 111/137 (81%)
 Frame = +2

Query: 2   EKAGKELIDLAPDDHASYVLLSNIYAMANNWSGVHEVRTAMWDRGIKKPPGCSSIELDGV 181
           +KAG+ LI+ AP+DH  YVLLSNIYA+  NW GVH VR  M+D G++K PG SSIE+DGV
Sbjct: 363 KKAGRRLIEAAPNDHTGYVLLSNIYALDGNWKGVHNVRKRMFDSGVQKVPGSSSIEVDGV 422

Query: 182 VHEFVVGDAAHSQKKDIYIMLDEMAKKLKVAGYKPKTQEVLLDIDEEEVKQSSLGHHSEK 361
           +HEF+ GD +HS+KKD+Y ML E+ ++LK+AGY P T +VLLDID+E+VK+SSL  HSEK
Sbjct: 423 IHEFISGDKSHSRKKDVYEMLGEICQQLKIAGYAPDTSQVLLDIDDEDVKESSLALHSEK 482

Query: 362 LAVAFGFISTSPRTTIR 412
           LA+AFG IST+P T IR
Sbjct: 483 LAIAFGLISTAPGTPIR 499


>ref|XP_002460391.1| hypothetical protein SORBIDRAFT_02g027420 [Sorghum bicolor]
           gi|241923768|gb|EER96912.1| hypothetical protein
           SORBIDRAFT_02g027420 [Sorghum bicolor]
          Length = 573

 Score =  184 bits (467), Expect = 6e-45
 Identities = 88/137 (64%), Positives = 110/137 (80%)
 Frame = +2

Query: 2   EKAGKELIDLAPDDHASYVLLSNIYAMANNWSGVHEVRTAMWDRGIKKPPGCSSIELDGV 181
           +KAG  LI+ AP+DHA YVLLSNIYA+  NW  VH+VR  M DRG+ K PG SS+EL+GV
Sbjct: 403 KKAGHRLIEAAPNDHAGYVLLSNIYALDGNWGRVHKVRKLMLDRGVLKTPGSSSVELNGV 462

Query: 182 VHEFVVGDAAHSQKKDIYIMLDEMAKKLKVAGYKPKTQEVLLDIDEEEVKQSSLGHHSEK 361
           +HEF+ GD +HS+K+DIY MLDE+ ++LK AGY P T +VLLDID+E+VK+SSL  HSEK
Sbjct: 463 IHEFISGDKSHSRKRDIYKMLDEICQQLKSAGYTPDTSQVLLDIDDEDVKESSLAVHSEK 522

Query: 362 LAVAFGFISTSPRTTIR 412
           LA+AFG IST+P T IR
Sbjct: 523 LAIAFGLISTAPGTPIR 539


>dbj|BAJ86422.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 582

 Score =  181 bits (458), Expect = 7e-44
 Identities = 86/137 (62%), Positives = 111/137 (81%)
 Frame = +2

Query: 2   EKAGKELIDLAPDDHASYVLLSNIYAMANNWSGVHEVRTAMWDRGIKKPPGCSSIELDGV 181
           +KAG  LI+ AP+DHA YVLLSNIYA+  NW GV++VR  M + G++K PG SSIELDGV
Sbjct: 398 KKAGHRLIEAAPNDHAGYVLLSNIYALDGNWKGVYKVRKLMLNCGVQKVPGSSSIELDGV 457

Query: 182 VHEFVVGDAAHSQKKDIYIMLDEMAKKLKVAGYKPKTQEVLLDIDEEEVKQSSLGHHSEK 361
           +HEF+ GD +HS+K+D+Y ML E+ ++LKVAGY P T +VLLDID+E+VK+SSL  HSE+
Sbjct: 458 IHEFISGDKSHSRKRDVYEMLSEICQQLKVAGYAPDTSQVLLDIDDEDVKESSLALHSER 517

Query: 362 LAVAFGFISTSPRTTIR 412
           LA+AFG IST+P T IR
Sbjct: 518 LALAFGLISTAPGTPIR 534