BLASTX nr result

ID: Coptis25_contig00042527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042527
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509512.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|XP_002298629.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
emb|CBI21348.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_002967167.1| hypothetical protein SELMODRAFT_86596 [Selag...    74   1e-11
ref|XP_003548519.1| PREDICTED: uncharacterized protein LOC100813...    68   7e-10

>ref|XP_002509512.1| conserved hypothetical protein [Ricinus communis]
            gi|223549411|gb|EEF50899.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1095

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 41/86 (47%), Positives = 60/86 (69%)
 Frame = +1

Query: 64   VSEWYILVRWLLRLPQSSTPSFKLGVKFIAKGLVLPFLPRKYWQTLLPGSSQPSTGFVPV 243
            ++EWY L++ +L L +    SF+LG+KF AKGLVLPFLPRK+W  ++P SSQ  TG   +
Sbjct: 914  INEWYALIKCILGLSRPKRNSFRLGLKFAAKGLVLPFLPRKHWSGVIPNSSQMKTGLSTI 973

Query: 244  LPTSPETEFIRENEALQHVNPLSSIT 321
            LP  PETEF+  +  +++V P  ++T
Sbjct: 974  LP--PETEFVTRDTTIENVEPYRAMT 997


>ref|XP_002298629.1| predicted protein [Populus trichocarpa] gi|222845887|gb|EEE83434.1|
            predicted protein [Populus trichocarpa]
          Length = 1156

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 45/86 (52%), Positives = 56/86 (65%)
 Frame = +1

Query: 64   VSEWYILVRWLLRLPQSSTPSFKLGVKFIAKGLVLPFLPRKYWQTLLPGSSQPSTGFVPV 243
            V+EWY LV+ LLRL Q    SFK G+K  AKGLVLPFLPRK+W  ++P  SQP TG   V
Sbjct: 980  VNEWYALVKCLLRLSQPRRNSFKFGLKLAAKGLVLPFLPRKHWSKVIPIFSQPKTGLSAV 1039

Query: 244  LPTSPETEFIRENEALQHVNPLSSIT 321
             P SPE+     +    H +PLS+I+
Sbjct: 1040 PPLSPES----VDRRTHHGDPLSTIS 1061


>emb|CBI21348.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 42/85 (49%), Positives = 53/85 (62%)
 Frame = +1

Query: 1   KEQTMGXXXXXXXXXXXXXXXVSEWYILVRWLLRLPQSSTPSFKLGVKFIAKGLVLPFLP 180
           +E+T+G               V+EWY L++ LLRL Q    SFKLG+K  A+GLVLPFLP
Sbjct: 302 QERTVGFVMLALLFLTFSSQLVNEWYALMKCLLRLSQPQKNSFKLGLKCAAQGLVLPFLP 361

Query: 181 RKYWQTLLPGSSQPSTGFVPVLPTS 255
           RK+W T++P SSQP TG  P  P S
Sbjct: 362 RKHWWTIIPLSSQPKTG--PAEPLS 384


>ref|XP_002967167.1| hypothetical protein SELMODRAFT_86596 [Selaginella moellendorffii]
           gi|300165158|gb|EFJ31766.1| hypothetical protein
           SELMODRAFT_86596 [Selaginella moellendorffii]
          Length = 760

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 32/83 (38%), Positives = 50/83 (60%)
 Frame = +1

Query: 64  VSEWYILVRWLLRLPQSSTPSFKLGVKFIAKGLVLPFLPRKYWQTLLPGSSQPSTGFVPV 243
           ++EWY L+  LL+L     PSFK G++ + KGLV PF+P++ W   +    QP  G VPV
Sbjct: 567 INEWYALMEKLLKLSAPQEPSFKAGMRMLGKGLVFPFIPQRKWPKFITPPQQPRIGLVPV 626

Query: 244 LPTSPETEFIRENEALQHVNPLS 312
           +  SP  +F + ++ L   +P+S
Sbjct: 627 VHLSPSPDFQQRSKVLPSSSPIS 649


>ref|XP_003548519.1| PREDICTED: uncharacterized protein LOC100813171 [Glycine max]
          Length = 947

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/85 (40%), Positives = 52/85 (61%)
 Frame = +1

Query: 67   SEWYILVRWLLRLPQSSTPSFKLGVKFIAKGLVLPFLPRKYWQTLLPGSSQPSTGFVPVL 246
            ++WY +V  LL L QS   S + G+K  AKGL+LPFLP K+W +++   SQ  T  + + 
Sbjct: 766  NQWYAMVNSLLNLSQSQNKSLRDGLKLAAKGLILPFLPSKHWSSVISTFSQTETDILSLN 825

Query: 247  PTSPETEFIRENEALQHVNPLSSIT 321
            P    TEF R N    +++P+S++T
Sbjct: 826  PICSGTEFERRNRN-GYMDPISAMT 849


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