BLASTX nr result

ID: Coptis25_contig00042505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042505
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265296.1| PREDICTED: uncharacterized protein LOC100244...   107   8e-22
emb|CAN78108.1| hypothetical protein VITISV_036780 [Vitis vinifera]   106   2e-21
ref|XP_002267758.2| PREDICTED: uncharacterized protein LOC100242...   101   6e-20
emb|CBI35631.3| unnamed protein product [Vitis vinifera]              101   6e-20
ref|XP_002513921.1| r2r3-myb transcription factor, putative [Ric...    99   4e-19

>ref|XP_002265296.1| PREDICTED: uncharacterized protein LOC100244550 [Vitis vinifera]
           gi|296090478|emb|CBI40674.3| unnamed protein product
           [Vitis vinifera]
          Length = 330

 Score =  107 bits (268), Expect = 8e-22
 Identities = 60/102 (58%), Positives = 73/102 (71%), Gaps = 3/102 (2%)
 Frame = +1

Query: 1   MTHRPRTDIFSSLSHLIALANLRDVVVDHHPWEDHAVRLQAEAAQMARLQYIQYXXXXXX 180
           MTHRPRTD+F+SL HLIAL NL++++ +H  WE+HAVRLQAEAAQMARLQY+QY      
Sbjct: 124 MTHRPRTDMFASLPHLIALVNLKELM-EHQSWEEHAVRLQAEAAQMARLQYLQYLLQSPA 182

Query: 181 XXXXXXXXXXGITDMEAFNLLNSL---KEHPLSNPPSQLESP 297
                     GITDMEAFNLL+SL   K+  + N  SQLE+P
Sbjct: 183 SVASASNSISGITDMEAFNLLSSLSSIKDTQVLN-SSQLETP 223


>emb|CAN78108.1| hypothetical protein VITISV_036780 [Vitis vinifera]
          Length = 330

 Score =  106 bits (265), Expect = 2e-21
 Identities = 60/102 (58%), Positives = 72/102 (70%), Gaps = 3/102 (2%)
 Frame = +1

Query: 1   MTHRPRTDIFSSLSHLIALANLRDVVVDHHPWEDHAVRLQAEAAQMARLQYIQYXXXXXX 180
           MTHRPRTD+F+SL HLIAL NL++++  H  WE+HAVRLQAEAAQMARLQY+QY      
Sbjct: 124 MTHRPRTDMFASLPHLIALVNLKELMX-HQSWEEHAVRLQAEAAQMARLQYLQYLLQSPA 182

Query: 181 XXXXXXXXXXGITDMEAFNLLNSL---KEHPLSNPPSQLESP 297
                     GITDMEAFNLL+SL   K+  + N  SQLE+P
Sbjct: 183 SVASASNSISGITDMEAFNLLSSLSSIKDTQVLN-SSQLETP 223


>ref|XP_002267758.2| PREDICTED: uncharacterized protein LOC100242842 [Vitis vinifera]
          Length = 346

 Score =  101 bits (252), Expect = 6e-20
 Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
 Frame = +1

Query: 1   MTHRPRTDIFSSLSHLIALANLRDVVVDHHPWEDHAVRLQAEAAQMARLQYIQYXXXXXX 180
           MTHRPRTD+F+SL HLIAL NL++++ +H  WE+HAVRLQAEAAQMARLQ +QY      
Sbjct: 124 MTHRPRTDMFASLPHLIALVNLKELM-EHQSWEEHAVRLQAEAAQMARLQCLQYLLQSPA 182

Query: 181 XXXXXXXXXXGITDMEAFNLLNSL---KEHPLSNPPSQLES 294
                     GITDMEAFNLL+SL   K+  + N  SQLE+
Sbjct: 183 SVATASNSISGITDMEAFNLLSSLSSIKDTQVLN-SSQLET 222


>emb|CBI35631.3| unnamed protein product [Vitis vinifera]
          Length = 330

 Score =  101 bits (252), Expect = 6e-20
 Identities = 58/101 (57%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
 Frame = +1

Query: 1   MTHRPRTDIFSSLSHLIALANLRDVVVDHHPWEDHAVRLQAEAAQMARLQYIQYXXXXXX 180
           MTHRPRTD+F+SL HLIAL NL++++ +H  WE+HAVRLQAEAAQMARLQ +QY      
Sbjct: 124 MTHRPRTDMFASLPHLIALVNLKELM-EHQSWEEHAVRLQAEAAQMARLQCLQYLLQSPA 182

Query: 181 XXXXXXXXXXGITDMEAFNLLNSL---KEHPLSNPPSQLES 294
                     GITDMEAFNLL+SL   K+  + N  SQLE+
Sbjct: 183 SVATASNSISGITDMEAFNLLSSLSSIKDTQVLN-SSQLET 222


>ref|XP_002513921.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223547007|gb|EEF48504.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 280

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 52/102 (50%), Positives = 70/102 (68%), Gaps = 3/102 (2%)
 Frame = +1

Query: 1   MTHRPRTDIFSSLSHLIALANLRDVVVDHHPWEDHAVRLQAEAAQMARLQYIQYXXXXXX 180
           MTH+PRTD+F++L HL+AL NL+D+  +H P ++ A+RLQAEA Q+A+LQY+Q+      
Sbjct: 66  MTHQPRTDLFATLPHLVALLNLKDLTDNHPPLDEQAMRLQAEAMQLAKLQYVQFLLQSAT 125

Query: 181 XXXXXXXXXXGITDMEAFNLLNS---LKEHPLSNPPSQLESP 297
                     GITDME FNLLNS   +KE P+ N  SQLE+P
Sbjct: 126 SITSNSYGQNGITDMEIFNLLNSAPTIKETPVIN-SSQLENP 166


Top