BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042499
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166348.1| PREDICTED: transcription factor RF2b-like [C...    74   1e-11
ref|XP_004140027.1| PREDICTED: transcription factor RF2b-like [C...    73   3e-11
ref|XP_002518293.1| Transcription factor RF2b, putative [Ricinus...    68   7e-10
ref|XP_003537351.1| PREDICTED: transcription factor RF2b-like [G...    67   1e-09
ref|XP_002266792.1| PREDICTED: transcription factor RF2b-like [V...    66   3e-09

>ref|XP_004166348.1| PREDICTED: transcription factor RF2b-like [Cucumis sativus]
          Length = 396

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
 Frame = -2

Query: 327 NLGTYHMSYAPPSFFP---QHLGAGGNQNIPFQQFHPSQSNISRHPQFTANSHAFSEXXX 157
           NLG +HM+YAP SF     Q  G+ G QN+    F  S SN+S HP   ++SH+ SE   
Sbjct: 301 NLGMHHMAYAPSSFIQLSQQQPGSTGLQNMQIPPFGHSPSNMSTHPLLPSDSHSLSEVLQ 360

Query: 156 XXXXXXXXXXDISNGRSSHLVKTEGPSISASESNSTF 46
                     DIS+  SSH VK+EGPS+SASES++TF
Sbjct: 361 TDSLGRLQGLDISSKGSSH-VKSEGPSLSASESSTTF 396


>ref|XP_004140027.1| PREDICTED: transcription factor RF2b-like [Cucumis sativus]
          Length = 396

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/97 (45%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
 Frame = -2

Query: 327 NLGTYHMSYAPPSFFP---QHLGAGGNQNIPFQQFHPSQSNISRHPQFTANSHAFSEXXX 157
           NLG +HM+YAP SF     Q  G+ G QN+    F  S SN+S HP   ++SH+ SE   
Sbjct: 301 NLGMHHMAYAPSSFIQLSQQQPGSTGLQNMQIPPFGHSPSNMSTHPLLPSDSHSLSEVLQ 360

Query: 156 XXXXXXXXXXDISNGRSSHLVKTEGPSISASESNSTF 46
                     DIS+ + S LVK+EGPS+SASES++TF
Sbjct: 361 TDSLGRLQGLDISS-KGSSLVKSEGPSLSASESSTTF 396


>ref|XP_002518293.1| Transcription factor RF2b, putative [Ricinus communis]
           gi|223542513|gb|EEF44053.1| Transcription factor RF2b,
           putative [Ricinus communis]
          Length = 386

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
 Frame = -2

Query: 327 NLGTYHMSYAPPSFF--PQHLGAGGNQNIPFQQFHPSQSNISRHPQFTANSHAFSEXXXX 154
           NLG + M Y P +FF  PQ  G+  + N+ F  +  SQ++I  H     NSH FSE    
Sbjct: 292 NLGMHQMPYTPSNFFSHPQQSGSANHPNMQFPPYAHSQTSIPGHHLHQTNSHTFSELMQN 351

Query: 153 XXXXXXXXXDISNGRSSHLVKTEGPSISASESNSTF 46
                    DIS+ +  ++VK+EGPS+SASES+STF
Sbjct: 352 DSLGRLQGLDISS-KGPNIVKSEGPSLSASESSSTF 386


>ref|XP_003537351.1| PREDICTED: transcription factor RF2b-like [Glycine max]
          Length = 385

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
 Frame = -2

Query: 327 NLGTYHMSYAPPSFF--PQHLGAGGNQNIPFQQFHPSQSNISRHPQFTANSHAFSEXXXX 154
           NLG + M YA P+FF  P H G  G+QN+    F  SQS +  H     NSH  S+    
Sbjct: 291 NLGMHQMPYAGPNFFSIPPHSGPSGHQNMQLPPFGHSQSTVPTHQLQQTNSHQMSDILQN 350

Query: 153 XXXXXXXXXDISNGRSSHLVKTEGPSISASESNSTF 46
                    DIS+ + + +VK+EGPSISA+ES++TF
Sbjct: 351 DQLGRLQGLDISS-KGTPMVKSEGPSISANESSTTF 385


>ref|XP_002266792.1| PREDICTED: transcription factor RF2b-like [Vitis vinifera]
          Length = 344

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/96 (44%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
 Frame = -2

Query: 327 NLGTYHMSYAPPSFF--PQHLGAGGNQNIPFQQFHPSQSNISRHPQFTANSHAFSEXXXX 154
           +LG   M Y P SF   PQ +G  G  N+    FH S SN+S       NS   SE    
Sbjct: 250 DLGMQQMLYTPSSFLSLPQQIGPAGQPNMQLPPFHHSHSNMSTQYLQPINSQPISEILQN 309

Query: 153 XXXXXXXXXDISNGRSSHLVKTEGPSISASESNSTF 46
                    DIS+ R SHLVK+EGPSISA ES+STF
Sbjct: 310 DPLGRLQGLDISS-RGSHLVKSEGPSISACESSSTF 344