BLASTX nr result

ID: Coptis25_contig00042489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042489
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512743.1| serine-threonine protein kinase, plant-type,...   101   7e-20
ref|XP_004146720.1| PREDICTED: putative leucine-rich repeat rece...    98   8e-19
ref|XP_004161420.1| PREDICTED: LOW QUALITY PROTEIN: putative leu...    90   2e-16
ref|XP_004137881.1| PREDICTED: putative leucine-rich repeat rece...    90   2e-16
ref|XP_002528406.1| Receptor protein kinase CLAVATA1 precursor, ...    89   3e-16

>ref|XP_002512743.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223547754|gb|EEF49246.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 969

 Score =  101 bits (251), Expect = 7e-20
 Identities = 55/104 (52%), Positives = 66/104 (63%)
 Frame = -3

Query: 314 PMELSKMKMVRAIDLSSNNFSGNIPPNLSNCEAAETINLANNSLQGKLPXXXXXXXXXXX 135
           P+ELSK++ V+ ID+SSNN +GNI   +S+C A  TINL++NSLQG LP           
Sbjct: 471 PIELSKLENVQEIDVSSNNLTGNIFLQISSCIALRTINLSHNSLQGHLPDSLGDLKNLES 530

Query: 134 XXXXXXXXSGEIPASFSKSHSLVQLNLSFNNFNGSIPQGGLFNS 3
                   SG IP S SK HSL  LNLSFNNF G IP GG+FNS
Sbjct: 531 LDVSGNQLSGMIPLSLSKIHSLTYLNLSFNNFEGLIPSGGIFNS 574


>ref|XP_004146720.1| PREDICTED: putative leucine-rich repeat receptor-like
           serine/threonine-protein kinase At2g24130-like [Cucumis
           sativus]
          Length = 992

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/103 (49%), Positives = 62/103 (60%)
 Frame = -3

Query: 314 PMELSKMKMVRAIDLSSNNFSGNIPPNLSNCEAAETINLANNSLQGKLPXXXXXXXXXXX 135
           P+ELSKM MV AIDLSSNN SG+IP  L NC A E +NL++NS  G LP           
Sbjct: 465 PLELSKMDMVLAIDLSSNNLSGSIPSQLGNCIALENLNLSDNSFDGSLPISIGQLPYLQS 524

Query: 134 XXXXXXXXSGEIPASFSKSHSLVQLNLSFNNFNGSIPQGGLFN 6
                   +G IP S   S +L +LNLSFNNF+G IP  G+F+
Sbjct: 525 LDVSLNHLTGNIPESLENSPTLKKLNLSFNNFSGKIPDNGVFS 567



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
 Frame = -3

Query: 314 PMELSKMKMVRAIDLSSNNFSGNIPPNLSNCEAAETINLANNSLQGKLP-XXXXXXXXXX 138
           P  L+ +  +R + L SNN SG IP +L  C   E ++L+NN + G LP           
Sbjct: 392 PEALANLTQLRKLLLYSNNLSGTIPSSLGKCINLEILDLSNNQISGVLPSEVAGLRSLKL 451

Query: 137 XXXXXXXXXSGEIPASFSKSHSLVQLNLSFNNFNGSIP 24
                     G +P   SK   ++ ++LS NN +GSIP
Sbjct: 452 YLNLSRNHLHGPLPLELSKMDMVLAIDLSSNNLSGSIP 489


>ref|XP_004161420.1| PREDICTED: LOW QUALITY PROTEIN: putative leucine-rich repeat
           receptor-like serine/threonine-protein kinase
           At2g24130-like [Cucumis sativus]
          Length = 1009

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/104 (48%), Positives = 59/104 (56%)
 Frame = -3

Query: 314 PMELSKMKMVRAIDLSSNNFSGNIPPNLSNCEAAETINLANNSLQGKLPXXXXXXXXXXX 135
           P+ELSK+K V+ +DLSSNN +G I P +S+C A   IN +NNSLQG LP           
Sbjct: 501 PIELSKLKNVQEMDLSSNNLTGTIFPQISSCIALRLINFSNNSLQGHLPDSLGELENLES 560

Query: 134 XXXXXXXXSGEIPASFSKSHSLVQLNLSFNNFNGSIPQGGLFNS 3
                   SG IP S  K  SL  LNLS NNF G IP+ G F S
Sbjct: 561 FDISENQLSGPIPVSLGKLQSLTYLNLSSNNFQGMIPREGFFKS 604


>ref|XP_004137881.1| PREDICTED: putative leucine-rich repeat receptor-like
           serine/threonine-protein kinase At2g24130-like [Cucumis
           sativus]
          Length = 1009

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/104 (48%), Positives = 59/104 (56%)
 Frame = -3

Query: 314 PMELSKMKMVRAIDLSSNNFSGNIPPNLSNCEAAETINLANNSLQGKLPXXXXXXXXXXX 135
           P+ELSK+K V+ +DLSSNN +G I P +S+C A   IN +NNSLQG LP           
Sbjct: 501 PIELSKLKNVQEMDLSSNNLTGTIFPQISSCIALRLINFSNNSLQGHLPDSLGELENLES 560

Query: 134 XXXXXXXXSGEIPASFSKSHSLVQLNLSFNNFNGSIPQGGLFNS 3
                   SG IP S  K  SL  LNLS NNF G IP+ G F S
Sbjct: 561 FDISENQLSGPIPVSLGKLQSLTYLNLSSNNFQGMIPREGFFKS 604


>ref|XP_002528406.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus
           communis] gi|223532194|gb|EEF33999.1| Receptor protein
           kinase CLAVATA1 precursor, putative [Ricinus communis]
          Length = 960

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/104 (46%), Positives = 59/104 (56%)
 Frame = -3

Query: 314 PMELSKMKMVRAIDLSSNNFSGNIPPNLSNCEAAETINLANNSLQGKLPXXXXXXXXXXX 135
           P+ELSKM MV AIDLSSNN S  IPP L +C A E +NL+ N L G LP           
Sbjct: 445 PLELSKMDMVLAIDLSSNNLSSTIPPQLGSCIALEYLNLSGNILDGPLPDSIGKLPYLKQ 504

Query: 134 XXXXXXXXSGEIPASFSKSHSLVQLNLSFNNFNGSIPQGGLFNS 3
                    G+IP S   S +L  LN SFNNF+G++ + G F+S
Sbjct: 505 LDVSLNQLHGKIPESLQASPTLKHLNFSFNNFSGNVSKTGAFSS 548


Top