BLASTX nr result

ID: Coptis25_contig00042480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042480
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001169159.1| putative XH domain family protein [Zea mays]...    76   3e-12
ref|XP_003566895.1| PREDICTED: uncharacterized protein LOC100821...    73   3e-11
dbj|BAK05532.1| predicted protein [Hordeum vulgare subsp. vulgare]     73   3e-11
ref|XP_002457444.1| hypothetical protein SORBIDRAFT_03g007450 [S...    72   5e-11
dbj|BAD21477.1| putative X1 [Oryza sativa Japonica Group] gi|215...    72   6e-11

>ref|NP_001169159.1| putative XH domain family protein [Zea mays]
           gi|223975231|gb|ACN31803.1| unknown [Zea mays]
           gi|414876546|tpg|DAA53677.1| TPA: putative XH domain
           family protein [Zea mays]
          Length = 530

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/112 (39%), Positives = 61/112 (54%)
 Frame = -2

Query: 337 AKGQLKRLLNTMEESYLGLKHSEGDANFKMQRXXXXXXXXXXXKANEVDYREDLYRDLLV 158
           AK +L+  + T+E     + H  GD + + ++           K +E++  E L + L++
Sbjct: 306 AKQKLELEVQTLESKMKVMMHMPGDQDSESKKKMDELAEELKEKVDELEAMESLNQTLII 365

Query: 157 VERKKNDELQEAHKALIDGFEHFMSHNRATIGIKRMGELDEKPFRDVCLQKL 2
            ERK NDELQ A K LIDGF       RA IGIKRMGELD K F   C ++L
Sbjct: 366 KERKSNDELQHARKELIDGFMELAVVGRANIGIKRMGELDLKAFGIACKKRL 417


>ref|XP_003566895.1| PREDICTED: uncharacterized protein LOC100821394 [Brachypodium
           distachyon]
          Length = 599

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/112 (39%), Positives = 63/112 (56%)
 Frame = -2

Query: 337 AKGQLKRLLNTMEESYLGLKHSEGDANFKMQRXXXXXXXXXXXKANEVDYREDLYRDLLV 158
           AK +L+  +  ++     +KH  G+ + + ++           K +E+D  E L++ LL+
Sbjct: 376 AKQKLELEIKQLQGKLEVMKHMPGEEDSESKKKINELSEELQDKYDEMDAMESLHQTLLI 435

Query: 157 VERKKNDELQEAHKALIDGFEHFMSHNRATIGIKRMGELDEKPFRDVCLQKL 2
            ERK NDELQ+A K LIDG    ++  RA IGIKRMGELD K F   C  KL
Sbjct: 436 KERKSNDELQDARKKLIDGLLDIIT-GRANIGIKRMGELDLKSFTVACKHKL 486


>dbj|BAK05532.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 601

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 44/112 (39%), Positives = 64/112 (57%)
 Frame = -2

Query: 337 AKGQLKRLLNTMEESYLGLKHSEGDANFKMQRXXXXXXXXXXXKANEVDYREDLYRDLLV 158
           AK +L+  +  ++     +KH  G+ + + ++           K +E+D  E LY  LL+
Sbjct: 378 AKQKLELEIKQLQGKLEIMKHMPGEEDSESKKRIDELSEELQDKYDEMDAMESLYHALLI 437

Query: 157 VERKKNDELQEAHKALIDGFEHFMSHNRATIGIKRMGELDEKPFRDVCLQKL 2
            ERK NDELQ+A + LIDG +  ++  RA IGIKRMGELD K F   C +KL
Sbjct: 438 KERKSNDELQDARRKLIDGLQ-TITTGRANIGIKRMGELDLKSFAIACGRKL 488


>ref|XP_002457444.1| hypothetical protein SORBIDRAFT_03g007450 [Sorghum bicolor]
           gi|241929419|gb|EES02564.1| hypothetical protein
           SORBIDRAFT_03g007450 [Sorghum bicolor]
          Length = 261

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 42/112 (37%), Positives = 61/112 (54%)
 Frame = -2

Query: 337 AKGQLKRLLNTMEESYLGLKHSEGDANFKMQRXXXXXXXXXXXKANEVDYREDLYRDLLV 158
           AK +L+  + ++E     +KH  G+ + + ++           K +E++  E L + L++
Sbjct: 37  AKQKLELEIQSLESKMKVMKHMPGEQDSESKKKMDELAEELKEKMDEMEAMEFLNQTLII 96

Query: 157 VERKKNDELQEAHKALIDGFEHFMSHNRATIGIKRMGELDEKPFRDVCLQKL 2
            ERK NDELQ A K LI GF       RA IGIKRMGELD K F   C ++L
Sbjct: 97  KERKSNDELQHARKELIHGFNELAVAGRANIGIKRMGELDLKVFGIACRKRL 148


>dbj|BAD21477.1| putative X1 [Oryza sativa Japonica Group]
           gi|215769103|dbj|BAH01332.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 628

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 42/110 (38%), Positives = 63/110 (57%)
 Frame = -2

Query: 334 KGQLKRLLNTMEESYLGLKHSEGDANFKMQRXXXXXXXXXXXKANEVDYREDLYRDLLVV 155
           K +L+  +  +    L ++H EG+    +++           K  E++Y E L + L++ 
Sbjct: 405 KQKLELEIQQLRGRLLVVQHMEGEG-VDVKKRTDELTEELNEKIEEMEYMEGLNQTLIIK 463

Query: 154 ERKKNDELQEAHKALIDGFEHFMSHNRATIGIKRMGELDEKPFRDVCLQK 5
           ERK NDELQ+A KALI G    +   R+TIG+KRMGELDEKPF   C ++
Sbjct: 464 ERKTNDELQDAKKALISGLSELLG-PRSTIGLKRMGELDEKPFLAACKKR 512


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