BLASTX nr result

ID: Coptis25_contig00042475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042475
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFG71033.1| Pinus taeda anonymous locus 0_2551_02 genomic seq...   103   1e-20
ref|XP_002458511.1| hypothetical protein SORBIDRAFT_03g034920 [S...    82   5e-14
ref|XP_002443644.1| hypothetical protein SORBIDRAFT_08g022750 [S...    82   6e-14
ref|XP_002443211.1| hypothetical protein SORBIDRAFT_08g015460 [S...    80   1e-13
ref|XP_002447931.1| hypothetical protein SORBIDRAFT_06g018328 [S...    80   2e-13

>gb|AFG71033.1| Pinus taeda anonymous locus 0_2551_02 genomic sequence
           gi|383175219|gb|AFG71034.1| Pinus taeda anonymous locus
           0_2551_02 genomic sequence gi|383175220|gb|AFG71035.1|
           Pinus taeda anonymous locus 0_2551_02 genomic sequence
           gi|383175221|gb|AFG71036.1| Pinus taeda anonymous locus
           0_2551_02 genomic sequence gi|383175222|gb|AFG71037.1|
           Pinus taeda anonymous locus 0_2551_02 genomic sequence
           gi|383175223|gb|AFG71038.1| Pinus taeda anonymous locus
           0_2551_02 genomic sequence gi|383175224|gb|AFG71039.1|
           Pinus taeda anonymous locus 0_2551_02 genomic sequence
           gi|383175225|gb|AFG71040.1| Pinus taeda anonymous locus
           0_2551_02 genomic sequence gi|383175226|gb|AFG71041.1|
           Pinus taeda anonymous locus 0_2551_02 genomic sequence
           gi|383175227|gb|AFG71042.1| Pinus taeda anonymous locus
           0_2551_02 genomic sequence gi|383175228|gb|AFG71043.1|
           Pinus taeda anonymous locus 0_2551_02 genomic sequence
           gi|383175229|gb|AFG71044.1| Pinus taeda anonymous locus
           0_2551_02 genomic sequence gi|383175230|gb|AFG71045.1|
           Pinus taeda anonymous locus 0_2551_02 genomic sequence
           gi|383175231|gb|AFG71046.1| Pinus taeda anonymous locus
           0_2551_02 genomic sequence gi|383175232|gb|AFG71047.1|
           Pinus taeda anonymous locus 0_2551_02 genomic sequence
           gi|383175233|gb|AFG71048.1| Pinus taeda anonymous locus
           0_2551_02 genomic sequence gi|383175235|gb|AFG71049.1|
           Pinus taeda anonymous locus 0_2551_02 genomic sequence
          Length = 104

 Score =  103 bits (257), Expect = 1e-20
 Identities = 48/73 (65%), Positives = 62/73 (84%)
 Frame = -3

Query: 223 AIEDRETMSAISWWDMYGITTNELYNLAIKVLSQSVNTSVAEREWSTYSYIHGVKKNKMN 44
           AI+DRET SA+ WW+M+G  T  L +LA++VLSQ VNTS AER WS+YS+IH VK+N+++
Sbjct: 27  AIKDRETFSALEWWNMHGGGTPLLQSLALRVLSQVVNTSSAERCWSSYSFIHSVKRNRLS 86

Query: 43  VDRAESLVYVHYN 5
           +DRAESLVYVHYN
Sbjct: 87  LDRAESLVYVHYN 99


>ref|XP_002458511.1| hypothetical protein SORBIDRAFT_03g034920 [Sorghum bicolor]
           gi|241930486|gb|EES03631.1| hypothetical protein
           SORBIDRAFT_03g034920 [Sorghum bicolor]
          Length = 687

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 35/75 (46%), Positives = 53/75 (70%)
 Frame = -3

Query: 229 PQAIEDRETMSAISWWDMYGITTNELYNLAIKVLSQSVNTSVAEREWSTYSYIHGVKKNK 50
           P +I DR  +S ++WW  +G +  +L +LA+K+LSQ  ++S  ER WSTYS++H VK+N 
Sbjct: 541 PDSIHDRWAVSPMTWWTNHGQSAPQLMSLAMKLLSQPASSSCCERNWSTYSFVHSVKRNA 600

Query: 49  MNVDRAESLVYVHYN 5
           +  +RAE LV+VH N
Sbjct: 601 LTPERAEDLVFVHSN 615


>ref|XP_002443644.1| hypothetical protein SORBIDRAFT_08g022750 [Sorghum bicolor]
           gi|241944337|gb|EES17482.1| hypothetical protein
           SORBIDRAFT_08g022750 [Sorghum bicolor]
          Length = 684

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 35/75 (46%), Positives = 53/75 (70%)
 Frame = -3

Query: 229 PQAIEDRETMSAISWWDMYGITTNELYNLAIKVLSQSVNTSVAEREWSTYSYIHGVKKNK 50
           P +I DR  +S ++WW  +G +  +L +LA+K+LSQ  ++S  ER WSTYS++H VK+N 
Sbjct: 538 PDSIHDRWAVSPMTWWTNHGQSAPQLMSLAMKLLSQPASSSCCERNWSTYSFVHSVKRNV 597

Query: 49  MNVDRAESLVYVHYN 5
           +  +RAE LV+VH N
Sbjct: 598 LTPERAEDLVFVHSN 612


>ref|XP_002443211.1| hypothetical protein SORBIDRAFT_08g015460 [Sorghum bicolor]
           gi|241943904|gb|EES17049.1| hypothetical protein
           SORBIDRAFT_08g015460 [Sorghum bicolor]
          Length = 698

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 36/75 (48%), Positives = 51/75 (68%)
 Frame = -3

Query: 229 PQAIEDRETMSAISWWDMYGITTNELYNLAIKVLSQSVNTSVAEREWSTYSYIHGVKKNK 50
           P +I DR  +S ++WW  +G     L +LA+K+LSQ  ++S  ER WSTYS+IH VK+N 
Sbjct: 513 PDSIHDRWVVSPMTWWTNHGQAAPMLMSLAMKLLSQPASSSCCERNWSTYSFIHSVKRNA 572

Query: 49  MNVDRAESLVYVHYN 5
           +  +RAE LV+VH N
Sbjct: 573 LTPERAEDLVFVHTN 587


>ref|XP_002447931.1| hypothetical protein SORBIDRAFT_06g018328 [Sorghum bicolor]
           gi|241939114|gb|EES12259.1| hypothetical protein
           SORBIDRAFT_06g018328 [Sorghum bicolor]
          Length = 219

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/75 (48%), Positives = 51/75 (68%)
 Frame = -3

Query: 229 PQAIEDRETMSAISWWDMYGITTNELYNLAIKVLSQSVNTSVAEREWSTYSYIHGVKKNK 50
           P +I DR  +S ++WW  +G     L +LA+K+LSQ  ++S  ER WSTYS+IH VK+N 
Sbjct: 74  PDSIHDRWAVSPMTWWTNHGQGAAMLMSLAMKLLSQPASSSCCERNWSTYSFIHSVKRNA 133

Query: 49  MNVDRAESLVYVHYN 5
           +  +RAE LV+VH N
Sbjct: 134 LTPERAEDLVFVHTN 148


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