BLASTX nr result

ID: Coptis25_contig00042470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042470
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273407.1| PREDICTED: ankyrin-3-like [Vitis vinifera]         77   2e-12
emb|CAN73340.1| hypothetical protein VITISV_042402 [Vitis vinifera]    77   2e-12
emb|CBI25437.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_003628372.1| Ankyrin repeat domain-containing protein [Me...    71   8e-11
ref|XP_002520772.1| ankyrin repeat-containing protein, putative ...    70   1e-10

>ref|XP_002273407.1| PREDICTED: ankyrin-3-like [Vitis vinifera]
          Length = 470

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 45/105 (42%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
 Frame = -1

Query: 310 LVNESDNSDKPMS-LLSEAGFKTASENFDRGDIVDCQDSDGHKALNVCASKGNKEVLEIP 134
           L   + N D+PM+ +L + G           D        G   L++   KG+KE++EI 
Sbjct: 282 LYRAASNGDRPMAEMLIQIG----------ADPTITAGHRGRSPLDIARDKGHKEIVEIL 331

Query: 133 E-GDLALTAARRGDVKNLEKLLRKGVNVNHGDQYGLTALHAAAIK 2
           E G+  LT ARRG++K LE LL++G ++NH DQYGLTALH AAIK
Sbjct: 332 EQGETVLTTARRGELKPLELLLQRGASINHRDQYGLTALHVAAIK 376


>emb|CAN73340.1| hypothetical protein VITISV_042402 [Vitis vinifera]
          Length = 989

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 45/105 (42%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
 Frame = -1

Query: 310 LVNESDNSDKPMS-LLSEAGFKTASENFDRGDIVDCQDSDGHKALNVCASKGNKEVLEIP 134
           L   + N D+PM+ +L + G           D        G   L++   KG+KE++EI 
Sbjct: 282 LYRAASNGDRPMAEMLIQIG----------ADPTITAGHRGRSPLDIARDKGHKEIVEIL 331

Query: 133 E-GDLALTAARRGDVKNLEKLLRKGVNVNHGDQYGLTALHAAAIK 2
           E G+  LT ARRG++K LE LL++G ++NH DQYGLTALH AAIK
Sbjct: 332 EQGETVLTTARRGELKPLELLLQRGASINHRDQYGLTALHVAAIK 376


>emb|CBI25437.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/65 (56%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
 Frame = -1

Query: 193 GHKALNVCASKGNKEVLEIPE-GDLALTAARRGDVKNLEKLLRKGVNVNHGDQYGLTALH 17
           G   L++   KG+KE++EI E G+  LT ARRG++K LE LL++G ++NH DQYGLTALH
Sbjct: 241 GRSPLDIARDKGHKEIVEILEQGETVLTTARRGELKPLELLLQRGASINHRDQYGLTALH 300

Query: 16  AAAIK 2
            AAIK
Sbjct: 301 VAAIK 305


>ref|XP_003628372.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
           gi|355522394|gb|AET02848.1| Ankyrin repeat
           domain-containing protein [Medicago truncatula]
          Length = 361

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
 Frame = -1

Query: 355 IVTELTRHEMDLLIRLVNESDNSDKPMSLLSEAGFKT-ASENFDRGDIVDCQDSDGHKAL 179
           +V +L+  E + L+R+  E  + D  + LL EAG +   +  FD+    D     G    
Sbjct: 158 VVLDLSLKESESLLRVATELAHPDDMVHLLLEAGLRVHEAVGFDKFKGSDDVPVVGGNV- 216

Query: 178 NVCASKGNKEVLEIPEGDLALTAARRGDVKNLEKLLRKGVNVNHGDQYGLTALHAAAIK 2
              A    + V ++  G+L L A+R G+V+ +E LLR+GVN+N+ D YGLTALHAAA K
Sbjct: 217 ---ARDEEQHVEDVEHGELMLEASRHGNVREVELLLRRGVNLNYRDHYGLTALHAAAFK 272


>ref|XP_002520772.1| ankyrin repeat-containing protein, putative [Ricinus communis]
           gi|223539903|gb|EEF41481.1| ankyrin repeat-containing
           protein, putative [Ricinus communis]
          Length = 469

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = -1

Query: 202 DSDGHKALNVCASKGNKEVLEIPE-GDLALTAARRGDVKNLEKLLRKGVNVNHGDQYGLT 26
           D  G  A +V   KG++E++ I E G+  L AAR GD+K LE LLRKG N  + DQYGLT
Sbjct: 311 DDRGRSAFDVARDKGHEEIVGILEQGEDVLRAARGGDLKLLESLLRKGANAKYHDQYGLT 370

Query: 25  ALHAAAIK 2
           +LHAAAIK
Sbjct: 371 SLHAAAIK 378


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