BLASTX nr result

ID: Coptis25_contig00042464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042464
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69917.1| hypothetical protein VITISV_044429 [Vitis vinifera]    62   5e-08
emb|CAN69474.1| hypothetical protein VITISV_014375 [Vitis vinifera]    62   6e-08
emb|CAN80718.1| hypothetical protein VITISV_004147 [Vitis vinifera]    61   1e-07
emb|CAN70896.1| hypothetical protein VITISV_012940 [Vitis vinifera]    61   1e-07
emb|CAN75944.1| hypothetical protein VITISV_040742 [Vitis vinifera]    61   1e-07

>emb|CAN69917.1| hypothetical protein VITISV_044429 [Vitis vinifera]
          Length = 613

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
 Frame = +3

Query: 9   RMLTLNNLGMR--HVQKLLIIFCPLCLNDGESVNNVLV*SPFSWSIWSAFICLSGAQWVC 182
           ++LTL+ L  R  H+       C LC  + E++N++L+    +  +W+  + L G QWV 
Sbjct: 471 KVLTLDRLQRRGWHLPNR----CFLCGCEEETINHILIHCTMAKGLWNIILVLCGVQWVF 526

Query: 183 LGSVKELLASWNLSDHSQKMNAFWSMIQFEVT*GLWLERNKRHFDGEI 326
             SVKE+L+SW  S   +K    W  I   +   +W ERNK  F G +
Sbjct: 527 PNSVKEVLSSWKGSFVGRKRKKVWKSIPLFIFWTIWKERNKLAFKGGV 574


>emb|CAN69474.1| hypothetical protein VITISV_014375 [Vitis vinifera]
          Length = 1383

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
 Frame = +3

Query: 9    RMLTLNNLGMR--HVQKLLIIFCPLCLNDGESVNNVLV*SPFSWSIWSAFICLSGAQWVC 182
            ++LTL+ L  R  H+       C LC  + E++N++L+    +  +W+  + L G QWV 
Sbjct: 898  KVLTLDRLQRRGWHLPNR----CFLCGCEEETINHILIHCTMAKGLWNIILALCGVQWVF 953

Query: 183  LGSVKELLASWNLSDHSQKMNAFWSMIQFEVT*GLWLERNKRHFDGEI 326
              SVKE+L+SW  S   +K    W  I   +   +W ERN+  F G +
Sbjct: 954  PNSVKEVLSSWKGSFVGRKRKEVWKSIPLFIFWTIWKERNRLXFKGGV 1001


>emb|CAN80718.1| hypothetical protein VITISV_004147 [Vitis vinifera]
          Length = 403

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
 Frame = +3

Query: 9   RMLTLNNLGMR--HVQKLLIIFCPLCLNDGESVNNVLV*SPFSWSIWSAFICLSGAQWVC 182
           ++LTL+ L  R  H+       C LC  + E++N++L+    +  +W   + L G QWV 
Sbjct: 261 KVLTLDRLQRRGWHLPNR----CFLCGCEEETINHILIHCTVAKGLWDIILALCGVQWVL 316

Query: 183 LGSVKELLASWNLSDHSQKMNAFWSMIQFEVT*GLWLERNKRHFDGEI 326
             SVKE+L+SW  S   +K    W  I   +   +W ERN+  F G +
Sbjct: 317 PNSVKEVLSSWKGSFVGRKRKKVWKSIPLFIFWTIWKERNRLAFKGGV 364


>emb|CAN70896.1| hypothetical protein VITISV_012940 [Vitis vinifera]
          Length = 563

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
 Frame = +3

Query: 9   RMLTLNNLGMR--HVQKLLIIFCPLCLNDGESVNNVLV*SPFSWSIWSAFICLSGAQWVC 182
           ++LTL+ L  R  H+       C LC  + E++N++L+    +  +W+  + L G QWV 
Sbjct: 421 KVLTLDRLQRRGWHLPNR----CFLCGCEEETINHILIHCTVAKGLWNIILALCGVQWVF 476

Query: 183 LGSVKELLASWNLSDHSQKMNAFWSMIQFEVT*GLWLERNKRHFDGEI 326
             SVKE+L+SW  S   +K    W  I   +   +W ERN+  F G +
Sbjct: 477 PNSVKEVLSSWKGSFVGRKRKEVWKSIPLFIFWTIWKERNRLAFKGGV 524


>emb|CAN75944.1| hypothetical protein VITISV_040742 [Vitis vinifera]
          Length = 464

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/106 (32%), Positives = 56/106 (52%)
 Frame = +3

Query: 9   RMLTLNNLGMRHVQKLLIIFCPLCLNDGESVNNVLV*SPFSWSIWSAFICLSGAQWVCLG 188
           ++LTL+ L  R     L+  C LC  + E++N++L+    +  +W+  + L G QWV   
Sbjct: 322 KVLTLDRLQRRGWH--LLNRCFLCGCEEETINHILIHCTVAKGLWNIILALCGVQWVFPN 379

Query: 189 SVKELLASWNLSDHSQKMNAFWSMIQFEVT*GLWLERNKRHFDGEI 326
           SV+E+L+SW  S   +K    W  I   +   +W ERN+  F G +
Sbjct: 380 SVEEVLSSWKGSFVGRKRKEVWKAIPLFIFWTIWKERNRLAFKGGV 425


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