BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042447
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat...    50   1e-09
emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]    50   2e-09

>ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g53330-like [Vitis vinifera]
          Length = 464

 Score = 49.7 bits (117), Expect(2) = 1e-09
 Identities = 25/40 (62%), Positives = 30/40 (75%)
 Frame = -2

Query: 328 LISELFRVGQKGEVNEVLEESG*NVCKPDTRTYNPVITGF 209
           LI+ LF+VG+K EV  VLEE   N CKPDT TYN +I+GF
Sbjct: 260 LIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGF 299



 Score = 38.1 bits (87), Expect(2) = 1e-09
 Identities = 25/45 (55%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = -3

Query: 213 DFEYASGVLKEMEEKERKQDKNSYNAITVGL--ESKVREAIDGFD 85
           DFE A GVL+EM  K  K D  SYN I  GL  E K REA D F+
Sbjct: 304 DFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFE 348


>emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
          Length = 418

 Score = 49.7 bits (117), Expect(2) = 2e-09
 Identities = 25/40 (62%), Positives = 30/40 (75%)
 Frame = -2

Query: 328 LISELFRVGQKGEVNEVLEESG*NVCKPDTRTYNPVITGF 209
           LI+ LF+VG+K EV  VLEE   N CKPDT TYN +I+GF
Sbjct: 260 LIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGF 299



 Score = 37.7 bits (86), Expect(2) = 2e-09
 Identities = 25/45 (55%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = -3

Query: 213 DFEYASGVLKEMEEKERKQDKNSYNAITVGL--ESKVREAIDGFD 85
           DFE A GVL+EM  K  K D  SYN I  GL  E K REA D F+
Sbjct: 304 DFEAAYGVLEEMVVKGCKPDVISYNVIISGLCKEGKWREANDLFE 348