BLASTX nr result

ID: Coptis25_contig00042407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042407
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321800.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002530144.1| conserved hypothetical protein [Ricinus comm...    92   3e-17
ref|XP_002332302.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002323904.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16
emb|CBI21214.3| unnamed protein product [Vitis vinifera]               87   2e-15

>ref|XP_002321800.1| predicted protein [Populus trichocarpa] gi|222868796|gb|EEF05927.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 50/95 (52%), Positives = 67/95 (70%)
 Frame = -1

Query: 288 PPTMKEASSSSPQNFQPTIAKISVSQICQSVGFKFTQSSALNALSNILTHYLKTLSKTAF 109
           PP + E    +P ++   I K +VSQICQSVGFK TQ SAL  L++I T YL+TL+KTA 
Sbjct: 27  PPPLAE----NPSDYAFKITKTAVSQICQSVGFKSTQLSALETLTHIATLYLQTLAKTAV 82

Query: 108 LSANSSGRTESNVFDIVYAIEEMSFVQGFKGCSNL 4
             +N+S RT+SN+FDI+ ++ +MS VQGF G S L
Sbjct: 83  SYSNASNRTQSNIFDIINSLHDMSSVQGFTGGSTL 117


>ref|XP_002530144.1| conserved hypothetical protein [Ricinus communis]
           gi|223530343|gb|EEF32236.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 257

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/87 (54%), Positives = 63/87 (72%)
 Frame = -1

Query: 264 SSSPQNFQPTIAKISVSQICQSVGFKFTQSSALNALSNILTHYLKTLSKTAFLSANSSGR 85
           ++ P +F   I KISVSQICQSVGFK TQ SAL  L++I T YLK L+K +   +++S R
Sbjct: 17  ATDPSDFPFQITKISVSQICQSVGFKSTQLSALETLTHIATLYLKNLAKASASYSSASNR 76

Query: 84  TESNVFDIVYAIEEMSFVQGFKGCSNL 4
           T+SNVFDI+ A+ ++S +QGF G S L
Sbjct: 77  TQSNVFDIINALHDLSSIQGFTGASTL 103


>ref|XP_002332302.1| predicted protein [Populus trichocarpa] gi|222832464|gb|EEE70941.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/97 (49%), Positives = 68/97 (70%)
 Frame = -1

Query: 294 KKPPTMKEASSSSPQNFQPTIAKISVSQICQSVGFKFTQSSALNALSNILTHYLKTLSKT 115
           +KPP    A + +P ++   I K +VSQICQSVGFK TQ SAL  L+++ T  L+TL+KT
Sbjct: 15  QKPP----APAENPSDYVFKITKTAVSQICQSVGFKTTQLSALETLTHVATLCLQTLAKT 70

Query: 114 AFLSANSSGRTESNVFDIVYAIEEMSFVQGFKGCSNL 4
           A L +N+S RT+SN+FDI+ ++ +M  V+GF G S L
Sbjct: 71  AVLYSNASNRTQSNIFDIINSLHDMYSVRGFTGGSTL 107


>ref|XP_002323904.1| predicted protein [Populus trichocarpa] gi|222866906|gb|EEF04037.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/91 (48%), Positives = 60/91 (65%)
 Frame = -1

Query: 276 KEASSSSPQNFQPTIAKISVSQICQSVGFKFTQSSALNALSNILTHYLKTLSKTAFLSAN 97
           K  S  S   F   IAKI+V+Q+C++VGF+  Q SAL  LS++ T Y++ L KTA   AN
Sbjct: 20  KRKSRVSGDEFTRAIAKIAVAQMCETVGFQSFQQSALEKLSDVTTWYIRNLGKTAQFYAN 79

Query: 96  SSGRTESNVFDIVYAIEEMSFVQGFKGCSNL 4
            +GRTE NVFD++  +EE+   QGF G SN+
Sbjct: 80  LAGRTEGNVFDVIQGMEELGLSQGFAGASNV 110


>emb|CBI21214.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/85 (48%), Positives = 60/85 (70%)
 Frame = -1

Query: 261 SSPQNFQPTIAKISVSQICQSVGFKFTQSSALNALSNILTHYLKTLSKTAFLSANSSGRT 82
           SS ++F   IAKI+V+QIC+S GF+  Q SAL  LS ++  Y++ L KTA   ANS+ RT
Sbjct: 20  SSDRDFPQAIAKIAVAQICESAGFQGFQQSALETLSEVVVRYIRELGKTAHTYANSACRT 79

Query: 81  ESNVFDIVYAIEEMSFVQGFKGCSN 7
           E N+FDI+  +E+++ +QGF G S+
Sbjct: 80  ECNIFDIIQGLEDLASLQGFSGASD 104


Top