BLASTX nr result

ID: Coptis25_contig00042403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042403
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO60108.1| nodulin-like protein [Gossypium hirsutum]              163   2e-38
gb|AAO60157.1| putative nodulin protein [Gossypium hirsutum]          162   3e-38
emb|CBI39638.3| unnamed protein product [Vitis vinifera]              160   1e-37
ref|XP_002277072.1| PREDICTED: auxin-induced protein 5NG4 [Vitis...   160   1e-37
ref|XP_002892502.1| hypothetical protein ARALYDRAFT_888180 [Arab...   152   2e-35

>gb|AAO60108.1| nodulin-like protein [Gossypium hirsutum]
          Length = 376

 Score =  163 bits (412), Expect = 2e-38
 Identities = 76/130 (58%), Positives = 101/130 (77%), Gaps = 1/130 (0%)
 Frame = +1

Query: 1   RRSGQAKVVGTILCVGGAMLMSFYKGNLIKIGESSINWRYAENMTQRNSS-NAENTFLGP 177
           + SGQAKV+GT++CVGGAML+SFY G++I IGESSI+W YA  M   + S +  N FLGP
Sbjct: 127 KASGQAKVIGTLVCVGGAMLLSFYHGHIIGIGESSIHWNYANKMANSSPSPSGSNFFLGP 186

Query: 178 LLVVGSCIAWSGWFIIQTKMSKGFAAPYSSSALMCFMASIQCTIIGAFAEPNIKEWFLTS 357
            LV+ S +AW+ WFIIQ + SK F APY+S+ LMCFMASI+CTIIG F++P    W L+S
Sbjct: 187 FLVMASAVAWALWFIIQGQTSKSFPAPYTSTTLMCFMASIECTIIGIFSDPKPSAWSLSS 246

Query: 358 NIRLVAAVYS 387
           ++RL+AA+Y+
Sbjct: 247 SMRLIAALYA 256


>gb|AAO60157.1| putative nodulin protein [Gossypium hirsutum]
          Length = 374

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/130 (58%), Positives = 100/130 (76%), Gaps = 1/130 (0%)
 Frame = +1

Query: 1   RRSGQAKVVGTILCVGGAMLMSFYKGNLIKIGESSINWRYAENMTQRNSS-NAENTFLGP 177
           + SGQAKV+GT+ CVGGAML+SFY G++I IGESSI+W YA  M   + S +  N FLGP
Sbjct: 127 KASGQAKVIGTLACVGGAMLLSFYHGHIIGIGESSIHWNYANKMANSSPSPSGSNFFLGP 186

Query: 178 LLVVGSCIAWSGWFIIQTKMSKGFAAPYSSSALMCFMASIQCTIIGAFAEPNIKEWFLTS 357
            LV+ S +AW+ WFIIQ + SK F APY+S+ LMCFMASI+CTIIG F++P    W L+S
Sbjct: 187 FLVMASAVAWALWFIIQGQTSKSFPAPYTSTTLMCFMASIECTIIGIFSDPKPSAWSLSS 246

Query: 358 NIRLVAAVYS 387
           ++RL+AA+Y+
Sbjct: 247 SMRLIAALYA 256


>emb|CBI39638.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  160 bits (404), Expect = 1e-37
 Identities = 71/128 (55%), Positives = 97/128 (75%)
 Frame = +1

Query: 4   RSGQAKVVGTILCVGGAMLMSFYKGNLIKIGESSINWRYAENMTQRNSSNAENTFLGPLL 183
           R GQAKV+GT++C+GGAM+++FY+G+ I IGES I+W+YAE +  R+S +  N  LGP L
Sbjct: 128 RPGQAKVLGTVVCIGGAMILTFYRGHAINIGESGIHWKYAEQLKTRDSQSGANFILGPFL 187

Query: 184 VVGSCIAWSGWFIIQTKMSKGFAAPYSSSALMCFMASIQCTIIGAFAEPNIKEWFLTSNI 363
           ++ SCI+W+ WFIIQ +M   FAAPY+SS LMCFMASI+C +IG F +     W L  +I
Sbjct: 188 LITSCISWAIWFIIQGRMCVKFAAPYTSSTLMCFMASIECGVIGLFVDHQPSAWSLNDSI 247

Query: 364 RLVAAVYS 387
           RL+AA+YS
Sbjct: 248 RLIAALYS 255


>ref|XP_002277072.1| PREDICTED: auxin-induced protein 5NG4 [Vitis vinifera]
          Length = 356

 Score =  160 bits (404), Expect = 1e-37
 Identities = 71/128 (55%), Positives = 97/128 (75%)
 Frame = +1

Query: 4   RSGQAKVVGTILCVGGAMLMSFYKGNLIKIGESSINWRYAENMTQRNSSNAENTFLGPLL 183
           R GQAKV+GT++C+GGAM+++FY+G+ I IGES I+W+YAE +  R+S +  N  LGP L
Sbjct: 128 RPGQAKVLGTVVCIGGAMILTFYRGHAINIGESGIHWKYAEQLKTRDSQSGANFILGPFL 187

Query: 184 VVGSCIAWSGWFIIQTKMSKGFAAPYSSSALMCFMASIQCTIIGAFAEPNIKEWFLTSNI 363
           ++ SCI+W+ WFIIQ +M   FAAPY+SS LMCFMASI+C +IG F +     W L  +I
Sbjct: 188 LITSCISWAIWFIIQGRMCVKFAAPYTSSTLMCFMASIECGVIGLFVDHQPSAWSLNDSI 247

Query: 364 RLVAAVYS 387
           RL+AA+YS
Sbjct: 248 RLIAALYS 255


>ref|XP_002892502.1| hypothetical protein ARALYDRAFT_888180 [Arabidopsis lyrata subsp.
           lyrata] gi|297338344|gb|EFH68761.1| hypothetical protein
           ARALYDRAFT_888180 [Arabidopsis lyrata subsp. lyrata]
          Length = 375

 Score =  152 bits (385), Expect = 2e-35
 Identities = 69/130 (53%), Positives = 100/130 (76%), Gaps = 1/130 (0%)
 Frame = +1

Query: 1   RRSGQAKVVGTILCVGGAMLMSFYKGNLIKIGESSINWRYAENMTQRNSSNAE-NTFLGP 177
           + SGQAKV+GT++CV GAM++SFY G+ I IGES I+W YAEN+T++ SS+A  N FLGP
Sbjct: 128 KASGQAKVIGTLVCVIGAMVLSFYHGHTIGIGESKIHWAYAENITRQGSSSAHSNFFLGP 187

Query: 178 LLVVGSCIAWSGWFIIQTKMSKGFAAPYSSSALMCFMASIQCTIIGAFAEPNIKEWFLTS 357
            L++ + ++W+ WFIIQTKMS+ FAAPY+S+ LMC M SIQC  I   ++  + +W L+S
Sbjct: 188 FLIMAAAVSWAAWFIIQTKMSETFAAPYTSTLLMCLMGSIQCGAIALISDHKLSDWSLSS 247

Query: 358 NIRLVAAVYS 387
            +R ++A+Y+
Sbjct: 248 PLRFISALYA 257


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