BLASTX nr result

ID: Coptis25_contig00042399 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042399
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327566.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
gb|AAF06051.1|AC009513_7 F12P19.7 [Arabidopsis thaliana]               74   2e-11
ref|NP_564864.1| uncharacterized protein [Arabidopsis thaliana] ...    74   2e-11
gb|AAM63220.1| unknown [Arabidopsis thaliana]                          74   2e-11
ref|XP_003600642.1| hypothetical protein MTR_3g064600 [Medicago ...    72   6e-11

>ref|XP_002327566.1| predicted protein [Populus trichocarpa] gi|222836120|gb|EEE74541.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 36/46 (78%), Positives = 41/46 (89%)
 Frame = +2

Query: 119 NVSSISKVQDAKNFQVYYGQTFKVIKNRMDGKSYLLIQNNSRMATR 256
           +V +ISK +DA NF +YYGQTFKVIKN +DGKSYLLIQNNSRMATR
Sbjct: 9   SVRNISKTEDAVNFHIYYGQTFKVIKNVVDGKSYLLIQNNSRMATR 54


>gb|AAF06051.1|AC009513_7 F12P19.7 [Arabidopsis thaliana]
          Length = 416

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/45 (77%), Positives = 38/45 (84%)
 Frame = +2

Query: 122 VSSISKVQDAKNFQVYYGQTFKVIKNRMDGKSYLLIQNNSRMATR 256
           V  ISKV+DA NF +YYGQTFKVIKN +DGKSYLLIQN SRMA R
Sbjct: 34  VGIISKVEDATNFHIYYGQTFKVIKNAIDGKSYLLIQNTSRMAVR 78


>ref|NP_564864.1| uncharacterized protein [Arabidopsis thaliana]
           gi|15146232|gb|AAK83599.1| At1g65900/F12P19_7
           [Arabidopsis thaliana] gi|19699144|gb|AAL90938.1|
           At1g65900/F12P19_7 [Arabidopsis thaliana]
           gi|332196317|gb|AEE34438.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 408

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/45 (77%), Positives = 38/45 (84%)
 Frame = +2

Query: 122 VSSISKVQDAKNFQVYYGQTFKVIKNRMDGKSYLLIQNNSRMATR 256
           V  ISKV+DA NF +YYGQTFKVIKN +DGKSYLLIQN SRMA R
Sbjct: 34  VGIISKVEDATNFHIYYGQTFKVIKNAIDGKSYLLIQNTSRMAVR 78


>gb|AAM63220.1| unknown [Arabidopsis thaliana]
          Length = 389

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/45 (77%), Positives = 38/45 (84%)
 Frame = +2

Query: 122 VSSISKVQDAKNFQVYYGQTFKVIKNRMDGKSYLLIQNNSRMATR 256
           V  ISKV+DA NF +YYGQTFKVIKN +DGKSYLLIQN SRMA R
Sbjct: 15  VGIISKVEDATNFHIYYGQTFKVIKNAIDGKSYLLIQNTSRMAVR 59


>ref|XP_003600642.1| hypothetical protein MTR_3g064600 [Medicago truncatula]
           gi|355489690|gb|AES70893.1| hypothetical protein
           MTR_3g064600 [Medicago truncatula]
          Length = 404

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/45 (71%), Positives = 40/45 (88%)
 Frame = +2

Query: 122 VSSISKVQDAKNFQVYYGQTFKVIKNRMDGKSYLLIQNNSRMATR 256
           V + SKV+DA NF +YYGQTFKVIKN +DG+SYLL+QNNSR+A+R
Sbjct: 35  VGNFSKVEDAVNFHIYYGQTFKVIKNAVDGQSYLLLQNNSRIASR 79


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