BLASTX nr result

ID: Coptis25_contig00042398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042398
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20867.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_002281412.1| PREDICTED: probable peptide transporter At1g...   120   1e-25
ref|XP_002299719.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002885127.1| proton-dependent oligopeptide transport fami...   117   1e-24
ref|NP_188239.1| major facilitator protein [Arabidopsis thaliana...   117   1e-24

>emb|CBI20867.3| unnamed protein product [Vitis vinifera]
          Length = 1181

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/87 (67%), Positives = 69/87 (79%)
 Frame = -2

Query: 263  CSIAFGADQLIRKEDNPKNPRILQSYFSFYYASIGLSTVIALTVIVYIQDHLGWKLGFGI 84
            CSIAFGADQL  KE NP N  +LQS+F++YYASIG+STVIALT I YIQDHLGWK GFG+
Sbjct: 754  CSIAFGADQLDNKE-NPDNDTVLQSFFNWYYASIGVSTVIALTFIAYIQDHLGWKFGFGV 812

Query: 83   PVILMLLSALTFFFGYPLYVQVNANKS 3
            PVILM+ SAL F  G  LY++V   K+
Sbjct: 813  PVILMVFSALMFVLGSSLYIRVKPGKN 839



 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/87 (60%), Positives = 66/87 (75%)
 Frame = -2

Query: 263 CSIAFGADQLIRKEDNPKNPRILQSYFSFYYASIGLSTVIALTVIVYIQDHLGWKLGFGI 84
           CS+AFGADQL   ++NP + RIL S+F++YYAS  +STVI+LT+IVYIQDHLGW  GFG+
Sbjct: 165 CSMAFGADQL--DKENPDSERILDSFFNWYYASSAMSTVISLTIIVYIQDHLGWNFGFGV 222

Query: 83  PVILMLLSALTFFFGYPLYVQVNANKS 3
           P ILM  SAL F FG  LYV+   + S
Sbjct: 223 PAILMFFSALMFLFGSSLYVKEKPSSS 249


>ref|XP_002281412.1| PREDICTED: probable peptide transporter At1g52190 [Vitis vinifera]
          Length = 592

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/87 (67%), Positives = 69/87 (79%)
 Frame = -2

Query: 263 CSIAFGADQLIRKEDNPKNPRILQSYFSFYYASIGLSTVIALTVIVYIQDHLGWKLGFGI 84
           CSIAFGADQL  KE NP N  +LQS+F++YYASIG+STVIALT I YIQDHLGWK GFG+
Sbjct: 165 CSIAFGADQLDNKE-NPDNDTVLQSFFNWYYASIGVSTVIALTFIAYIQDHLGWKFGFGV 223

Query: 83  PVILMLLSALTFFFGYPLYVQVNANKS 3
           PVILM+ SAL F  G  LY++V   K+
Sbjct: 224 PVILMVFSALMFVLGSSLYIRVKPGKN 250


>ref|XP_002299719.1| predicted protein [Populus trichocarpa] gi|222846977|gb|EEE84524.1|
           predicted protein [Populus trichocarpa]
          Length = 479

 Score =  119 bits (298), Expect = 3e-25
 Identities = 57/87 (65%), Positives = 68/87 (78%)
 Frame = -2

Query: 263 CSIAFGADQLIRKEDNPKNPRILQSYFSFYYASIGLSTVIALTVIVYIQDHLGWKLGFGI 84
           CSIAFGADQL  K  NPKN R+L+S+F +YYAS  +S +I+LT IVYIQDHLGWK+GFG+
Sbjct: 45  CSIAFGADQLDNKS-NPKNERVLESFFGWYYASAAISVLISLTAIVYIQDHLGWKVGFGV 103

Query: 83  PVILMLLSALTFFFGYPLYVQVNANKS 3
           P ILM LSAL FFF  P YV+   +KS
Sbjct: 104 PAILMFLSALLFFFASPFYVKQKPSKS 130


>ref|XP_002885127.1| proton-dependent oligopeptide transport family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297330967|gb|EFH61386.1|
           proton-dependent oligopeptide transport family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 593

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/87 (64%), Positives = 68/87 (78%)
 Frame = -2

Query: 263 CSIAFGADQLIRKEDNPKNPRILQSYFSFYYASIGLSTVIALTVIVYIQDHLGWKLGFGI 84
           CS+AFGADQL  KE NPKN R+L+S+F +YYAS  ++ +IA TVIVYIQDHLGWK+GFGI
Sbjct: 163 CSLAFGADQLDNKE-NPKNERVLESFFGWYYASSSVAVLIAFTVIVYIQDHLGWKIGFGI 221

Query: 83  PVILMLLSALTFFFGYPLYVQVNANKS 3
           P ILML +   F F  PLYV+ N +KS
Sbjct: 222 PAILMLFAGFLFVFASPLYVKRNVSKS 248


>ref|NP_188239.1| major facilitator protein [Arabidopsis thaliana]
           gi|310947330|sp|Q8LPL2.2|PTR32_ARATH RecName:
           Full=Probable peptide/nitrate transporter At3g16180
           gi|332642260|gb|AEE75781.1| major facilitator protein
           [Arabidopsis thaliana]
          Length = 591

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/87 (64%), Positives = 69/87 (79%)
 Frame = -2

Query: 263 CSIAFGADQLIRKEDNPKNPRILQSYFSFYYASIGLSTVIALTVIVYIQDHLGWKLGFGI 84
           CS+AFGADQL  KE NPKN R+L+S+F +YYAS  ++ +IA TVIVYIQDHLGWK+GFGI
Sbjct: 162 CSLAFGADQLDNKE-NPKNERVLESFFGWYYASSSVAVLIAFTVIVYIQDHLGWKIGFGI 220

Query: 83  PVILMLLSALTFFFGYPLYVQVNANKS 3
           P ILMLL+   F F  PLYV+ + +KS
Sbjct: 221 PAILMLLAGFLFVFASPLYVKRDVSKS 247


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