BLASTX nr result

ID: Coptis25_contig00042387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042387
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317632.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_003631927.1| PREDICTED: uncharacterized protein LOC100854...    57   2e-06
ref|XP_002334939.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002528523.1| conserved hypothetical protein [Ricinus comm...    55   5e-06

>ref|XP_002317632.1| predicted protein [Populus trichocarpa] gi|222860697|gb|EEE98244.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/35 (71%), Positives = 30/35 (85%)
 Frame = -1

Query: 349 YRLRQYGRSNSFYSEAIADCLEFIKRTSVSTDDDE 245
           YR R +GRSNSFYSEAIADCLEFIKR+S+S +  +
Sbjct: 91  YRFRSFGRSNSFYSEAIADCLEFIKRSSISVEQKQ 125


>ref|XP_003631927.1| PREDICTED: uncharacterized protein LOC100854263 [Vitis vinifera]
          Length = 125

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = -1

Query: 346 RLRQYGRSNSFYSEAIADCLEFIKRTSVSTDD 251
           R R +GR+NSFYSEAIADCLEFIKR+S+S DD
Sbjct: 84  RFRSFGRTNSFYSEAIADCLEFIKRSSLSVDD 115


>ref|XP_002334939.1| predicted protein [Populus trichocarpa] gi|222832473|gb|EEE70950.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = -1

Query: 361 GGTGYRLRQYGRSNSFYSEAIADCLEFIKRTSVSTDDDE 245
           G   Y  R +GRSNSFYSEAIADCLEFIKR+S+S +  +
Sbjct: 102 GDEHYSCRSFGRSNSFYSEAIADCLEFIKRSSISVEQKQ 140


>ref|XP_002528523.1| conserved hypothetical protein [Ricinus communis]
           gi|223532025|gb|EEF33835.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 127

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/34 (70%), Positives = 30/34 (88%)
 Frame = -1

Query: 346 RLRQYGRSNSFYSEAIADCLEFIKRTSVSTDDDE 245
           R+R +GRSNSFYSEAIADCLEFIKR+S+S +  +
Sbjct: 90  RMRTFGRSNSFYSEAIADCLEFIKRSSISVEQKQ 123


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