BLASTX nr result

ID: Coptis25_contig00042378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042378
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72440.1| hypothetical protein VITISV_039162 [Vitis vinifera]    57   2e-09
emb|CAN74964.1| hypothetical protein VITISV_006810 [Vitis vinifera]    57   2e-09
emb|CAN80763.1| hypothetical protein VITISV_017069 [Vitis vinifera]    56   4e-09
emb|CAN70807.1| hypothetical protein VITISV_005311 [Vitis vinifera]    57   6e-09
emb|CAN62924.1| hypothetical protein VITISV_033234 [Vitis vinifera]    55   6e-09

>emb|CAN72440.1| hypothetical protein VITISV_039162 [Vitis vinifera]
          Length = 1253

 Score = 57.0 bits (136), Expect(3) = 2e-09
 Identities = 25/42 (59%), Positives = 31/42 (73%)
 Frame = +3

Query: 3    MYYDN*AAIFIVNNPMFHERNKHIEVDCHFIRYILMRKLIAT 128
            + YDN AA+ I +NP+FHER KHIEVDCHFIR  +    +AT
Sbjct: 1174 LIYDNQAALHIASNPVFHERTKHIEVDCHFIREKIASGCVAT 1215



 Score = 25.8 bits (55), Expect(3) = 2e-09
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 200  VTFHCAKLGIFDLYAPA 250
            + + C KLG +D+YAPA
Sbjct: 1237 IKYICNKLGAYDVYAPA 1253



 Score = 22.7 bits (47), Expect(3) = 2e-09
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 130  VKSENELGDIFTKPLA*VK*SLIC 201
            V S ++L DIFTK L   +   IC
Sbjct: 1218 VNSNDQLADIFTKSLRGPRIKYIC 1241


>emb|CAN74964.1| hypothetical protein VITISV_006810 [Vitis vinifera]
          Length = 1248

 Score = 57.0 bits (136), Expect(3) = 2e-09
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = +3

Query: 12   DN*AAIFIVNNPMFHERNKHIEVDCHFIRYILMRKLIATCQV 137
            DN AAI I +NP++HER KHIEVDCHFIR  +   LI+T  V
Sbjct: 1172 DNQAAIHIASNPVYHERTKHIEVDCHFIREKIQENLISTSYV 1213



 Score = 25.0 bits (53), Expect(3) = 2e-09
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 200  VTFHCAKLGIFDLYAPA 250
            V + C KLG+ ++YAPA
Sbjct: 1232 VEYFCNKLGMINIYAPA 1248



 Score = 23.5 bits (49), Expect(3) = 2e-09
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 130  VKSENELGDIFTKPL 174
            VK+  +LGDIFTK L
Sbjct: 1213 VKTGEQLGDIFTKAL 1227


>emb|CAN80763.1| hypothetical protein VITISV_017069 [Vitis vinifera]
          Length = 1127

 Score = 56.2 bits (134), Expect(3) = 4e-09
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = +3

Query: 12   DN*AAIFIVNNPMFHERNKHIEVDCHFIRYILMRKLIAT 128
            DN AAI I +NP++HER KHIEVDCHFIR  +   LI+T
Sbjct: 1051 DNQAAIHIASNPVYHERTKHIEVDCHFIREKIQENLIST 1089



 Score = 25.0 bits (53), Expect(3) = 4e-09
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 200  VTFHCAKLGIFDLYAPA 250
            V + C KLG+ ++YAPA
Sbjct: 1111 VEYFCNKLGMINIYAPA 1127



 Score = 23.5 bits (49), Expect(3) = 4e-09
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 130  VKSENELGDIFTKPL 174
            VK+  +LGDIFTK L
Sbjct: 1092 VKTGEQLGDIFTKAL 1106


>emb|CAN70807.1| hypothetical protein VITISV_005311 [Vitis vinifera]
          Length = 107

 Score = 57.0 bits (136), Expect(3) = 6e-09
 Identities = 25/42 (59%), Positives = 31/42 (73%)
 Frame = +3

Query: 3   MYYDN*AAIFIVNNPMFHERNKHIEVDCHFIRYILMRKLIAT 128
           + YDN AA+ I +NP+FHER KHIEVDCHFIR  +    +AT
Sbjct: 28  LIYDNQAALHIASNPVFHERTKHIEVDCHFIREKIASGCVAT 69



 Score = 26.2 bits (56), Expect(3) = 6e-09
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 200 VTFHCAKLGIFDLYAPA 250
           + + C KLG +D+YAPA
Sbjct: 91  IKYICNKLGAYDIYAPA 107



 Score = 21.2 bits (43), Expect(3) = 6e-09
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 130 VKSENELGDIFTKPLA*VK*SLIC 201
           V S ++L DIFT+ L   +   IC
Sbjct: 72  VNSNDQLADIFTESLRGPRIKYIC 95


>emb|CAN62924.1| hypothetical protein VITISV_033234 [Vitis vinifera]
          Length = 107

 Score = 55.5 bits (132), Expect(3) = 6e-09
 Identities = 24/39 (61%), Positives = 30/39 (76%)
 Frame = +3

Query: 12  DN*AAIFIVNNPMFHERNKHIEVDCHFIRYILMRKLIAT 128
           DN AA+ I +NP+FHER KHIEVDCHFIR  +  + +AT
Sbjct: 31  DNQAALHIASNPIFHERTKHIEVDCHFIREKIASRCVAT 69



 Score = 26.2 bits (56), Expect(3) = 6e-09
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 200 VTFHCAKLGIFDLYAPA 250
           + + C KLG +D+YAPA
Sbjct: 91  IKYICNKLGAYDIYAPA 107



 Score = 22.7 bits (47), Expect(3) = 6e-09
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 130 VKSENELGDIFTKPLA*VK*SLIC 201
           V S ++L DIFTK L   +   IC
Sbjct: 72  VNSNDQLADIFTKSLRGPRIKYIC 95


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