BLASTX nr result

ID: Coptis25_contig00042374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042374
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634420.1| PREDICTED: uncharacterized protein LOC100254...   150   8e-35
emb|CBI19243.3| unnamed protein product [Vitis vinifera]              150   8e-35
ref|XP_002301087.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|XP_002452867.1| hypothetical protein SORBIDRAFT_04g033895 [S...   140   1e-31
ref|XP_004136425.1| PREDICTED: uncharacterized protein LOC101206...   137   7e-31

>ref|XP_003634420.1| PREDICTED: uncharacterized protein LOC100254008 [Vitis vinifera]
          Length = 1304

 Score =  150 bits (380), Expect = 8e-35
 Identities = 76/125 (60%), Positives = 94/125 (75%)
 Frame = +2

Query: 2   LQSEEEILAKQSSELISEGTALKPKKIIGKVKVQVRKIKMALDPPTSCNFLSLKLPTIRT 181
           LQSEEE+L K+SSEL SEGT  KPKKIIGK+KVQVRK+KM+LDPP+ C+  SL+ PTI+ 
Sbjct: 436 LQSEEELLVKRSSELASEGTVPKPKKIIGKMKVQVRKVKMSLDPPSGCSMSSLRAPTIKL 495

Query: 182 DALRHHXXXXXXXXXXGCNSLSNVRVAPRMQTKGSFSRHSLAYVNASTQYVKQVSGLLKV 361
           ++LR+           G  +L  + V PR+   GSFSR SLAYV+AS+QY+KQVSGLLK 
Sbjct: 496 ESLRYRLSNLRSTFSSGWQALRRIHVVPRIPANGSFSRKSLAYVHASSQYIKQVSGLLKT 555

Query: 362 GVTTL 376
           GVTTL
Sbjct: 556 GVTTL 560


>emb|CBI19243.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score =  150 bits (380), Expect = 8e-35
 Identities = 76/125 (60%), Positives = 94/125 (75%)
 Frame = +2

Query: 2   LQSEEEILAKQSSELISEGTALKPKKIIGKVKVQVRKIKMALDPPTSCNFLSLKLPTIRT 181
           LQSEEE+L K+SSEL SEGT  KPKKIIGK+KVQVRK+KM+LDPP+ C+  SL+ PTI+ 
Sbjct: 387 LQSEEELLVKRSSELASEGTVPKPKKIIGKMKVQVRKVKMSLDPPSGCSMSSLRAPTIKL 446

Query: 182 DALRHHXXXXXXXXXXGCNSLSNVRVAPRMQTKGSFSRHSLAYVNASTQYVKQVSGLLKV 361
           ++LR+           G  +L  + V PR+   GSFSR SLAYV+AS+QY+KQVSGLLK 
Sbjct: 447 ESLRYRLSNLRSTFSSGWQALRRIHVVPRIPANGSFSRKSLAYVHASSQYIKQVSGLLKT 506

Query: 362 GVTTL 376
           GVTTL
Sbjct: 507 GVTTL 511


>ref|XP_002301087.1| predicted protein [Populus trichocarpa] gi|222842813|gb|EEE80360.1|
           predicted protein [Populus trichocarpa]
          Length = 925

 Score =  144 bits (362), Expect = 1e-32
 Identities = 71/125 (56%), Positives = 92/125 (73%)
 Frame = +2

Query: 2   LQSEEEILAKQSSELISEGTALKPKKIIGKVKVQVRKIKMALDPPTSCNFLSLKLPTIRT 181
           LQSEEE+LAK+SSEL+ EG A KPKKIIGK+KVQVRK+K +LDPP+ C+  +L  P ++ 
Sbjct: 56  LQSEEELLAKRSSELVCEGAAPKPKKIIGKMKVQVRKVKTSLDPPSGCSISALSAPKLKL 115

Query: 182 DALRHHXXXXXXXXXXGCNSLSNVRVAPRMQTKGSFSRHSLAYVNASTQYVKQVSGLLKV 361
           D +++              +   +RVAPR+   GSFSR SLAYV+ASTQY+KQVSGLLK+
Sbjct: 116 DVVQYRLSKFQSSLSSAWKTFRKIRVAPRVPANGSFSRQSLAYVHASTQYIKQVSGLLKI 175

Query: 362 GVTTL 376
           GVT+L
Sbjct: 176 GVTSL 180


>ref|XP_002452867.1| hypothetical protein SORBIDRAFT_04g033895 [Sorghum bicolor]
           gi|241932698|gb|EES05843.1| hypothetical protein
           SORBIDRAFT_04g033895 [Sorghum bicolor]
          Length = 1195

 Score =  140 bits (352), Expect = 1e-31
 Identities = 70/125 (56%), Positives = 93/125 (74%)
 Frame = +2

Query: 2   LQSEEEILAKQSSELISEGTALKPKKIIGKVKVQVRKIKMALDPPTSCNFLSLKLPTIRT 181
           LQSEEE+++K++SEL+SEG A KPKK IGK+KVQVRK++M++D P+ CNF S  LP ++ 
Sbjct: 328 LQSEEELMSKRASELVSEGAASKPKKTIGKMKVQVRKVRMSVDMPSGCNFSS--LPMVKL 385

Query: 182 DALRHHXXXXXXXXXXGCNSLSNVRVAPRMQTKGSFSRHSLAYVNASTQYVKQVSGLLKV 361
           D++R+           G  S+  VRV P++    SFS+HSLAY+ AS QY+KQVSGLLKV
Sbjct: 386 DSVRYRLSNVQSTLSSGWESVRRVRVLPQLPANSSFSKHSLAYMQASAQYIKQVSGLLKV 445

Query: 362 GVTTL 376
           GVTTL
Sbjct: 446 GVTTL 450


>ref|XP_004136425.1| PREDICTED: uncharacterized protein LOC101206197 [Cucumis sativus]
           gi|449497068|ref|XP_004160302.1| PREDICTED:
           uncharacterized protein LOC101230265 [Cucumis sativus]
          Length = 1250

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/125 (52%), Positives = 89/125 (71%)
 Frame = +2

Query: 2   LQSEEEILAKQSSELISEGTALKPKKIIGKVKVQVRKIKMALDPPTSCNFLSLKLPTIRT 181
           LQSE+E+L K++SEL++EG   K KK IGK+KVQVRK+KM LDPPT CN L+L+ P +  
Sbjct: 392 LQSEDELLVKRNSELVNEGAPTKAKKTIGKIKVQVRKVKMGLDPPTGCNILALRTPAVNL 451

Query: 182 DALRHHXXXXXXXXXXGCNSLSNVRVAPRMQTKGSFSRHSLAYVNASTQYVKQVSGLLKV 361
           + +++           G ++L  +RVAPR+    S SR S+AYV+ASTQY+KQVS +LK 
Sbjct: 452 ETIKYQFSSFQSAVASGWHALHKIRVAPRIPPNSSLSRQSMAYVHASTQYIKQVSKVLKA 511

Query: 362 GVTTL 376
           GVTTL
Sbjct: 512 GVTTL 516


Top