BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042367
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76635.1| hypothetical protein VITISV_010657 [Vitis vinifera]   236   2e-60
gb|AAO73525.1| gag-pol polyprotein [Glycine max]                      213   1e-53
gb|AAC64917.1| gag-pol polyprotein [Glycine max]                      213   1e-53
gb|AAO73529.1| gag-pol polyprotein [Glycine max]                      212   2e-53
gb|AAO73521.1| gag-pol polyprotein [Glycine max]                      212   3e-53

>emb|CAN76635.1| hypothetical protein VITISV_010657 [Vitis vinifera]
          Length = 611

 Score =  236 bits (601), Expect = 2e-60
 Identities = 109/170 (64%), Positives = 145/170 (85%)
 Frame = -1

Query: 517 DKTLFVQHGKDYVLIAQVYVDDIVFGSTSEHRALSFADLMRTEFEMSMVGELNYFLGLQV 338
           D+TLF++   D +L+AQ+YVD+IVFG+TS + ALSF + M+TEF+ SMVGEL +FLGLQ+
Sbjct: 363 DRTLFIKRPNDELLVAQIYVDNIVFGATSSNIALSFVEEMKTEFKKSMVGELTFFLGLQI 422

Query: 337 KQLDNGIFVSQSKYARDILKKFGMDSAKHTRTPMSMTTKLSKDNSGKDGDIKLYRSIIGS 158
           +QL++ IF+SQS YAR+++KKFG++S+KH+RTPMS TTKL KD SGKD + KLYRS+IGS
Sbjct: 423 RQLEDAIFLSQSNYAREVVKKFGLESSKHSRTPMSTTTKLGKDASGKDVEQKLYRSMIGS 482

Query: 157 LLYLTASRPDIAFSVGSCARYQACPKESHFLAVKRILRYVHATSRYGLWY 8
           LLYLTAS PDI+FSVG+C +YQA PK+SH + +KRI+RY++ T  YGLWY
Sbjct: 483 LLYLTASHPDISFSVGACVKYQANPKKSHLMYIKRIIRYINETLNYGLWY 532


>gb|AAO73525.1| gag-pol polyprotein [Glycine max]
          Length = 1576

 Score =  213 bits (543), Expect = 1e-53
 Identities = 107/170 (62%), Positives = 131/170 (77%)
 Frame = -1

Query: 517  DKTLFVQHGKDYVLIAQVYVDDIVFGSTSEHRALSFADLMRTEFEMSMVGELNYFLGLQV 338
            DKTLFV+   + ++IAQ+YVDDIVFG  S      F   M++EFEMS+VGEL+YFLGLQV
Sbjct: 1243 DKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVPQMQSEFEMSLVGELHYFLGLQV 1302

Query: 337  KQLDNGIFVSQSKYARDILKKFGMDSAKHTRTPMSMTTKLSKDNSGKDGDIKLYRSIIGS 158
            KQ+++ IF+SQSKYA++I+KKFGM++A H RTP     KLSKD +G   D  LYRS+IGS
Sbjct: 1303 KQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQNLYRSMIGS 1362

Query: 157  LLYLTASRPDIAFSVGSCARYQACPKESHFLAVKRILRYVHATSRYGLWY 8
            LLYLTASRPDI F+VG CARYQA PK SH   VKRIL+YV+ TS YG+ Y
Sbjct: 1363 LLYLTASRPDITFAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMY 1412


>gb|AAC64917.1| gag-pol polyprotein [Glycine max]
          Length = 1550

 Score =  213 bits (542), Expect = 1e-53
 Identities = 106/170 (62%), Positives = 130/170 (76%)
 Frame = -1

Query: 517  DKTLFVQHGKDYVLIAQVYVDDIVFGSTSEHRALSFADLMRTEFEMSMVGELNYFLGLQV 338
            DKTLFV+   + ++IAQ+YVDDIVFG  S      F   M++EFEMS+VGEL YFLGLQV
Sbjct: 1217 DKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQV 1276

Query: 337  KQLDNGIFVSQSKYARDILKKFGMDSAKHTRTPMSMTTKLSKDNSGKDGDIKLYRSIIGS 158
            KQ+++ IF+SQSKYA++I+KKFGM++A H RTP     KLSKD +G   D  LYRS+IGS
Sbjct: 1277 KQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGS 1336

Query: 157  LLYLTASRPDIAFSVGSCARYQACPKESHFLAVKRILRYVHATSRYGLWY 8
            LLYLTASRPDI ++VG CARYQA PK SH   VKRIL+YV+ TS YG+ Y
Sbjct: 1337 LLYLTASRPDITYAVGGCARYQANPKISHLNQVKRILKYVNGTSDYGIMY 1386


>gb|AAO73529.1| gag-pol polyprotein [Glycine max]
          Length = 1577

 Score =  212 bits (540), Expect = 2e-53
 Identities = 106/170 (62%), Positives = 130/170 (76%)
 Frame = -1

Query: 517  DKTLFVQHGKDYVLIAQVYVDDIVFGSTSEHRALSFADLMRTEFEMSMVGELNYFLGLQV 338
            DKTLFV+   + ++IAQ+YVDDIVFG  S      F   M++EFEMS+VGEL YFLGLQV
Sbjct: 1244 DKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQV 1303

Query: 337  KQLDNGIFVSQSKYARDILKKFGMDSAKHTRTPMSMTTKLSKDNSGKDGDIKLYRSIIGS 158
            KQ+++ IF+SQSKYA++I+KKFGM++A H RTP     KLSKD +G   D  LYRS+IGS
Sbjct: 1304 KQMEDSIFLSQSKYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGS 1363

Query: 157  LLYLTASRPDIAFSVGSCARYQACPKESHFLAVKRILRYVHATSRYGLWY 8
            LLYLTASRPDI ++VG CARYQA PK SH   VKRIL+YV+ TS YG+ Y
Sbjct: 1364 LLYLTASRPDITYAVGVCARYQANPKISHLNQVKRILKYVNGTSDYGIMY 1413


>gb|AAO73521.1| gag-pol polyprotein [Glycine max]
          Length = 1574

 Score =  212 bits (539), Expect = 3e-53
 Identities = 105/170 (61%), Positives = 130/170 (76%)
 Frame = -1

Query: 517  DKTLFVQHGKDYVLIAQVYVDDIVFGSTSEHRALSFADLMRTEFEMSMVGELNYFLGLQV 338
            DKTLFV+   + ++IAQ+YVDDIVFG  S      F   M++EFEMS+VGEL YFLGLQV
Sbjct: 1241 DKTLFVKQDAENLMIAQIYVDDIVFGGMSNEMLRHFVQQMQSEFEMSLVGELTYFLGLQV 1300

Query: 337  KQLDNGIFVSQSKYARDILKKFGMDSAKHTRTPMSMTTKLSKDNSGKDGDIKLYRSIIGS 158
            KQ+++ IF+SQS+YA++I+KKFGM++A H RTP     KLSKD +G   D  LYRS+IGS
Sbjct: 1301 KQMEDSIFLSQSRYAKNIVKKFGMENASHKRTPAPTHLKLSKDEAGTSVDQSLYRSMIGS 1360

Query: 157  LLYLTASRPDIAFSVGSCARYQACPKESHFLAVKRILRYVHATSRYGLWY 8
            LLYLTASRPDI ++VG CARYQA PK SH   VKRIL+YV+ TS YG+ Y
Sbjct: 1361 LLYLTASRPDITYAVGVCARYQANPKISHLTQVKRILKYVNGTSDYGIMY 1410