BLASTX nr result
ID: Coptis25_contig00042338
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00042338 (647 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002321800.1| predicted protein [Populus trichocarpa] gi|2... 61 2e-07 ref|XP_002332302.1| predicted protein [Populus trichocarpa] gi|2... 56 7e-06 ref|XP_002332133.1| predicted protein [Populus trichocarpa] gi|2... 55 9e-06 >ref|XP_002321800.1| predicted protein [Populus trichocarpa] gi|222868796|gb|EEF05927.1| predicted protein [Populus trichocarpa] Length = 267 Score = 61.2 bits (147), Expect = 2e-07 Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 3/75 (4%) Frame = +1 Query: 4 CSNLKNGLLKSSVLNDIMIFVDAIDEIPFAKPIPRRG--KCKRMDFDVRGDQV-LRFSHF 174 CS+ GLL+S V DI FV+ DEIPFAKPIPR +R + D++ R H Sbjct: 119 CSSGGIGLLRSGVFKDIKSFVEFSDEIPFAKPIPRGNSISLRRNSIPLEIDELDSRGLHI 178 Query: 175 PTWVPRLPDLSTYKD 219 P W+PR PD ++YK+ Sbjct: 179 PRWLPRFPDETSYKN 193 >ref|XP_002332302.1| predicted protein [Populus trichocarpa] gi|222832464|gb|EEE70941.1| predicted protein [Populus trichocarpa] Length = 265 Score = 55.8 bits (133), Expect = 7e-06 Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 6/97 (6%) Frame = +1 Query: 4 CSNLKNGLLKSSVLNDIMIFVDAIDEIPFAKPIPR------RGKCKRMDFDVRGDQVLRF 165 C++ LL+SSV +I FV+ DEIPFAKPIPR R ++ + G + L Sbjct: 109 CNSSGMSLLRSSVFKNIKSFVEFSDEIPFAKPIPRGESISLRRNSIPLELNKLGSRGL-- 166 Query: 166 SHFPTWVPRLPDLSTYKDVDVKVCREEMFGVVVEEKN 276 H P W+PR PD S+Y + ++ +V+ EK+ Sbjct: 167 -HIPRWLPRCPDESSYNKCGDRCEKKRKGELVLWEKS 202 >ref|XP_002332133.1| predicted protein [Populus trichocarpa] gi|222875183|gb|EEF12314.1| predicted protein [Populus trichocarpa] Length = 218 Score = 55.5 bits (132), Expect = 9e-06 Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 6/97 (6%) Frame = +1 Query: 4 CSNLKNGLLKSSVLNDIMIFVDAIDEIPFAKPIPR------RGKCKRMDFDVRGDQVLRF 165 C++ LL+SSV +I FV+ DEIPFAKPIPR R ++ + G + L Sbjct: 85 CNSSGMSLLRSSVFKNIKSFVEFSDEIPFAKPIPRGESISLRRNSIPLELNKLGSRGL-- 142 Query: 166 SHFPTWVPRLPDLSTYKDVDVKVCREEMFGVVVEEKN 276 H P W+PR PD S+Y + ++ +V+ EK+ Sbjct: 143 -HIPRWLPRCPDESSYNKCADRCEKKRKGELVLWEKS 178