BLASTX nr result

ID: Coptis25_contig00042324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00042324
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521127.1| zinc finger protein, putative [Ricinus commu...   137   2e-30
ref|XP_002264981.1| PREDICTED: uncharacterized protein LOC100246...   124   8e-27
ref|XP_003532303.1| PREDICTED: zinc finger protein 7-like [Glyci...   116   2e-24
ref|NP_001238454.1| uncharacterized protein LOC100527084 [Glycin...   116   2e-24
ref|XP_002301764.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24

>ref|XP_002521127.1| zinc finger protein, putative [Ricinus communis]
           gi|223539696|gb|EEF41278.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 199

 Score =  137 bits (344), Expect = 2e-30
 Identities = 79/173 (45%), Positives = 101/173 (58%), Gaps = 2/173 (1%)
 Frame = -1

Query: 546 LEEEMQATQGKRNMEQQMDTRVFPCLFCSRKFYSSQALGGHQNAHKKERTAVRKAQRASE 367
           +E E + +Q     E   +TRVFPCLFCSRKFYSSQALGGHQNAHKKER A RKA+RASE
Sbjct: 1   METEQKVSQASTAEEDTRNTRVFPCLFCSRKFYSSQALGGHQNAHKKERNAARKAKRASE 60

Query: 366 HRLCSIASSPAIPQLVFPLTHQQ-LRSYNPSICLNAHAANIGHHFTPVQNYSDHFGSNGG 190
                 A  PA+P +  P  H   L   +PS+ + AHAA++  H  P   +SD FGSNG 
Sbjct: 61  -----FAPPPALPMVFAPSHHHHPLGLLHPSMYITAHAASL--HCYPSHQFSDTFGSNGA 113

Query: 189 TRFDYGIYXXXXXXXXXXXGCANSWYRTGLNEQGY-PWQRSYRCNGYAGESSN 34
            RFD                 ++ +++   +E+ +  WQRS RCNG+ G  SN
Sbjct: 114 PRFDNN---NNNGIIYGGNCSSHRYHQCEEDEKSFLNWQRSIRCNGFYGSGSN 163


>ref|XP_002264981.1| PREDICTED: uncharacterized protein LOC100246047 [Vitis vinifera]
           gi|297744296|emb|CBI37266.3| unnamed protein product
           [Vitis vinifera]
          Length = 183

 Score =  124 bits (312), Expect = 8e-27
 Identities = 77/160 (48%), Positives = 99/160 (61%), Gaps = 4/160 (2%)
 Frame = -1

Query: 489 TRVFPCLFCSRKFYSSQALGGHQNAHKKERTAVRKAQRASEHRLCSIASSPAIPQLVFPL 310
           TRVFPCLFCSRKF+SSQALGGHQNAHKKERTA RKA+RASE+ L S +++P  P LVF  
Sbjct: 13  TRVFPCLFCSRKFHSSQALGGHQNAHKKERTAARKAKRASEYTLNSFSATPP-PPLVFAP 71

Query: 309 THQQLRSYNPSICLNAHAANIGHHFTPVQNYSDHFGSNGGTRFDYGIYXXXXXXXXXXXG 130
           +H  L  +NPS+ + AHAA   +HF P   +S+ FG++G  R +  ++            
Sbjct: 72  SH-HLGIFNPSMYITAHAATFANHF-PTPQFSERFGASGAPRLENVVF-------YGGGS 122

Query: 129 CANSWY--RTGLNEQG-YPWQRS-YRCNGYAGESSNASMN 22
           C+ + Y  + G +EQ    WQRS  R N   G SS    N
Sbjct: 123 CSGNVYQHQLGDDEQSLVNWQRSALRNNAMNGGSSQHIKN 162


>ref|XP_003532303.1| PREDICTED: zinc finger protein 7-like [Glycine max]
          Length = 176

 Score =  116 bits (291), Expect = 2e-24
 Identities = 62/113 (54%), Positives = 76/113 (67%)
 Frame = -1

Query: 504 EQQMDTRVFPCLFCSRKFYSSQALGGHQNAHKKERTAVRKAQRASEHRLCSIASSPAIPQ 325
           +++  +RVFPCLFCSRKFYSSQALGGHQNAHKKERTA RKA++ASEH  C    SP    
Sbjct: 14  QREDSSRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKKASEHS-CVSFPSPLPTP 72

Query: 324 LVFPLTHQQLRSYNPSICLNAHAANIGHHFTPVQNYSDHFGSNGGTRFDYGIY 166
           +VF  TH  L   NP++ + AHAA + H   P    S+ FGSNG  RF   ++
Sbjct: 73  MVFAPTH--LGILNPAMFITAHAARLPH--LPSHQISEQFGSNGAPRFGNALF 121


>ref|NP_001238454.1| uncharacterized protein LOC100527084 [Glycine max]
           gi|255631518|gb|ACU16126.1| unknown [Glycine max]
          Length = 176

 Score =  116 bits (291), Expect = 2e-24
 Identities = 63/127 (49%), Positives = 82/127 (64%)
 Frame = -1

Query: 546 LEEEMQATQGKRNMEQQMDTRVFPCLFCSRKFYSSQALGGHQNAHKKERTAVRKAQRASE 367
           +E+E++  +   +  +   +R+FPCLFCSRKFYSSQALGGHQNAHKKERTA RKA++ASE
Sbjct: 1   MEDEVKVAKVGESQRED-SSRIFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKKASE 59

Query: 366 HRLCSIASSPAIPQLVFPLTHQQLRSYNPSICLNAHAANIGHHFTPVQNYSDHFGSNGGT 187
           H  C    SP    +VF  TH  L   NP++ + AHAA + H   P    S+ FGSNG  
Sbjct: 60  HS-CVSFPSPLPTPMVFAPTH--LDIINPAMFITAHAAKLPH--LPSHQISEQFGSNGAP 114

Query: 186 RFDYGIY 166
           RF   ++
Sbjct: 115 RFGNALF 121


>ref|XP_002301764.1| predicted protein [Populus trichocarpa] gi|222843490|gb|EEE81037.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  115 bits (288), Expect = 5e-24
 Identities = 76/177 (42%), Positives = 97/177 (54%), Gaps = 9/177 (5%)
 Frame = -1

Query: 504 EQQMDTRVFPCLFCSRKFYSSQALGGHQNAHKKERTAVRKAQRASEHRLCSIASSPAIPQ 325
           E+    RVFPCLFCSRKFYSSQALGGHQNAHKKER A RK +R SE+   + +  P  P 
Sbjct: 13  EEDTAARVFPCLFCSRKFYSSQALGGHQNAHKKERNAARKTRRVSEY---APSPPPTFPV 69

Query: 324 LVFPLTHQQLRSYNPSICLN-AHAANIGHHFTPVQNYSDHFGSNGGTRFDYGIYXXXXXX 148
           +  P  H  L   +PS+  + AHAAN+  H T  Q +SD  GS+G  RFD G+       
Sbjct: 70  IFSPSHH--LGLLHPSMYTSTAHAANLHCHPTHDQ-FSDRLGSSGAARFDSGV------- 119

Query: 147 XXXXXGCANSWYRTGLNEQG-----YPWQRSYRCNGYAGESSNASMNM---NQSLEI 1
                 C++  Y     +Q        WQRS RC G+ G   N  ++M   N ++EI
Sbjct: 120 LFYGGSCSSDRYDHHQYDQEDEQSLLNWQRSIRCPGFNGGGPNHHLSMANDNHNMEI 176


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